Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3835 ATGAACGTGGCAGAGACGAGGAACATATCCCTCCCTCCTCGCTTTCTCTTGTTGCTTTTCTTGCTTGCCAACCCACTTCCAGTCTGTCACTCATTTACCCCTTCCTCTCAAATCATTGCAGATTTGCAGTTTGCAGGCAGTAAGCTTCTCAAGAACAACCTTCCCCTGTTCCCTCTGAGGGAGATGGAGCAGTCAGAAAAACCAGCAAAGCAATCAGCAAAAGGGTCATCATTTCCGAGAGACCCTCGTGGTTCGCTCGAAGTGTTCAACCCTTCCTCCCACTCAACGGACAATCCATCAGACTCGCTGTTCCAATCTCAGCCAAAGTGGAAAACTTGGGTGGAGCCACCAACCACCGGCACCGGCACCAACAAGGATGAGATCACCAGCACATCATGGATGGCCTTCAAGGACTCCGATAGTCCACCGCCGCAGACTCTGTCCGCCATTCTCAACGAGCGACCTGAGCTGACCCCAAAATCTCCGTCCGCCGTGAATTTTGCCGGAGAAGTGGGCACAGCAGCGCAGAGAGCCGCTGAGTGGGGACTGGTGCTGAAGACTGACACGGAGACGGGGAAGCCGCAAGGAGTGGCTGTGAGAAACTCGGGAGGAGAGGAACTAAATGCGAAGATCACCGGCACTTCGAGAAGGAACTCAAACAACTCGGTGAGAAGCTCCGGCGAATCGTCAGATGACGGAGGAAAAGAAACACGGGGATTTCCGAGAATTTCAGAGGATTTGAAGGATGCTCTGTCAATGTTCCAACAGACATTCGTGGTCTCGGATGCGACCAAACCCGATTATCCGATCATGTACGCCAGTGCCGGATTCTTTAAGATGACCGGTTACACTTCTAAGGAGGTCATTGGGAGGAACTGTCGGTTTTTACAGGGAGCGGATACGGATCCAGAGGACGTGGCAAAGATAAGGGAAGCGCTGCAAGCAGGGACGAGTTACTGTGGAAGATTACTGAATTACAAGAAGGATGGCACTCCTTTCTGGAACCTCCTTACTATTTCCCCCATCAAGGATGACGATGGCAATGTCATCAAATTTATTGGAATGCAAGTGGAGGTTAGCAAGCATACGGAGGGGTCCAAGGAGAAAACGCTGCGTCCCAATGGATTGCCCGAATCTTTGATTCGATATGATGCTCGTCAAAAAGAGAAGGCTTCCTCCACCGTATCTGAGTTAGTGACGGCAGTGAGGCGGCCCCGAGCACTCAGTGAATCAGGAAAGCGTCCTTTGATCAGAAAATCTGGAGGTGATGAGGAAAACAGGGTAGAAAGTTTGCCAAGGAGGAAATCAGAGAGCGTTGCTTCATTAAGGCCAAAACCACATGGGGGGCATCGAAATTCAATGCAGCAAATCAATGAGCTGCCTGAAAAGAAACAGAAAAGTCGTCGTCGTTCTTTCATGGGGTTCATTAAGAAAAGTCAGCCCAATGATGAAAGCCTTGAGGAGAATGAAGTTGTGGAGGGCAGCTCAGAGAGTGAGGAAGAAGATGAGAGGCCTGATAGTATTGATGACAGCAAACTTGCGCAAAGAGAGAAGCGAAAGGGTCTTGATCTTGCAACAACACTTGAACGTATTGAGAAGAACTTCGTCATTACAGATCCAAGACTGCCTGATAATCCCATTATCTTCGCATCTGATAGTTTCCTAGAACTTACAGAGTACAGTCGTGAAGAAATTTTGGGAAGAAATTGCAGGTTTTTGCAAGGACCTGAAACTGATCCAGCAACTGTGAGAAAAATTAGAGAGGCAATTGACAATCAAAGAGAAGTTACGGTGCAGCTGATTAATTATACAAAGAGTGGGAAAAAGTTCTGGAACCTGTTTCATCTGCAACCTATGCGTGACCAGAAGGGAGAAGTACAATATTTTATTGGTGTTCAACTTGATGGTAGCCAGCATGTGGAACCTCTTCATAACTGTATTGCAGAAGACACGGCAAAGGAGGGAGAACAGTTGGTTAAAAAAACTGCAGAAAATGTTGATGAGGCAGTGAGAGAACTTCCAGATGCGAATTTGAAACCAGAAGATCTATGGTTAAATCACTCAAAAGTGGTTCTTCCAAAACCTCATAGGAAGGATGACCCTGCTTGGAGAGCTATCCTGAAGATCCTAGAAAGTGGAGAACAGATAGGCTTGAAGCATTTTAGACCAGTCAAACCTTTGGGATCTGGGGACACTGGCAGCGTGCATTTGGTGGAGCTATGTGGAACTGGCCAATACTTTGCCATGAAGGCTATGGACAAGAGTGTTATGCTAAATCGCAACAAGGTGCATAGAGCTTGCACAGAGAGAGAAATACTTGACATGTTGGACCATCCATTTCTTCCCGCATTATATGCTTCATTTCAGACCAAGGCTCACATTTGTCTGATAACTGACTATTTTGCCGGTGGAGAACTGTTCCTGCTTCTAGACCGGCAGCCAACAAAAGTTATCAGAGAAGATGCAGCTAGGTTTTACGCTGCTGAGATTGTGGTTGCGCTGGAGTACCTACATTGTCAAGGAATAATATATCGGGATTTGAAGCCAGAAAATGTGTTGCTCCAGGGCAATGGGCATGTGTCTCTGACAGATTTTGACTTGTCATGTTTGACATCCAGCAAACCACAGCTTTTATTTCCACCTTCAAATGAAAAGAAGAAACACAAAGCACAGCTGACTCCAATATTTGTTGCCGAACCTATGAGAGCATCAAATTCTTTTGTTGGCACGGAGGAGTACATAGCTCCGGAAATTATAACTGGTTCAGGCCATTCTAGTGCTGTGGATTGGTGGGCTCTTGGAATTCTTCTATATGAAATGATGTATGGATATACGCCATTCAGGGGGAAGACAAGGCAAAGAACATTTGCTTATATTCTTCACAAGGATCTTAAATTTCCCAAAAGTAAACCGGTAAGTCTGCTTGCAAAGCAGTTGATACACCGGTTGTTGCACAGAGATCCCCAGAAGCGATTGGGCTCAATGGAAGGAGCAAACGAAATAAAGCGTCACCCATTCTTCAAAGGTGTAAATTGGGCCCTCGTTCGTAGCATGTAA 3057 0.4655 MNVAETRNISLPPRFLLLLFLLANPLPVCHSFTPSSQIIADLQFAGSKLLKNNLPLFPLREMEQSEKPAKQSAKGSSFPRDPRGSLEVFNPSSHSTDNPSDSLFQSQPKWKTWVEPPTTGTGTNKDEITSTSWMAFKDSDSPPPQTLSAILNERPELTPKSPSAVNFAGEVGTAAQRAAEWGLVLKTDTETGKPQGVAVRNSGGEELNAKITGTSRRNSNNSVRSSGESSDDGGKETRGFPRISEDLKDALSMFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPEDVAKIREALQAGTSYCGRLLNYKKDGTPFWNLLTISPIKDDDGNVIKFIGMQVEVSKHTEGSKEKTLRPNGLPESLIRYDARQKEKASSTVSELVTAVRRPRALSESGKRPLIRKSGGDEENRVESLPRRKSESVASLRPKPHGGHRNSMQQINELPEKKQKSRRRSFMGFIKKSQPNDESLEENEVVEGSSESEEEDERPDSIDDSKLAQREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDNQREVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNCIAEDTAKEGEQLVKKTAENVDEAVRELPDANLKPEDLWLNHSKVVLPKPHRKDDPAWRAILKILESGEQIGLKHFRPVKPLGSGDTGSVHLVELCGTGQYFAMKAMDKSVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKAHICLITDYFAGGELFLLLDRQPTKVIREDAARFYAAEIVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSSKPQLLFPPSNEKKKHKAQLTPIFVAEPMRASNSFVGTEEYIAPEIITGSGHSSAVDWWALGILLYEMMYGYTPFRGKTRQRTFAYILHKDLKFPKSKPVSLLAKQLIHRLLHRDPQKRLGSMEGANEIKRHPFFKGVNWALVRSM 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3835 1018 MobiDBLite consensus disorder prediction 88 127 - -
Acco01g3835 1018 Gene3D Phosphorylase Kinase; domain 1 720 804 - -
Acco01g3835 1018 Pfam PAS domain 543 635 IPR000014 -
Acco01g3835 1018 Pfam PAS domain 264 360 IPR000014 -
Acco01g3835 1018 Gene3D PAS domain 257 412 - -
Acco01g3835 1018 ProSiteProfiles PAC domain profile. 594 648 IPR000700 -
Acco01g3835 1018 SUPERFAMILY Protein kinase-like (PK-like) 706 1015 IPR011009 -
Acco01g3835 1018 SMART serkin_6 721 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3835 1018 MobiDBLite consensus disorder prediction 63 127 - -
Acco01g3835 1018 Gene3D Transferase(Phosphotransferase) domain 1 805 1016 - -
Acco01g3835 1018 ProSiteProfiles PAC domain profile. 317 371 IPR000700 -
Acco01g3835 1018 SUPERFAMILY PYP-like sensor domain (PAS domain) 264 356 IPR035965 -
Acco01g3835 1018 Coils Coil 652 672 - -
Acco01g3835 1018 CDD PAS 535 635 IPR000014 -
Acco01g3835 1018 SUPERFAMILY PYP-like sensor domain (PAS domain) 536 635 IPR035965 -
Acco01g3835 1018 ProSiteProfiles Protein kinase domain profile. 721 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3835 1018 NCBIfam PAS domain S-box protein 545 635 IPR000014 -
Acco01g3835 1018 NCBIfam PAS domain S-box protein 270 363 IPR000014 -
Acco01g3835 1018 MobiDBLite consensus disorder prediction 212 240 - -
Acco01g3835 1018 MobiDBLite consensus disorder prediction 212 228 - -
Acco01g3835 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 842 854 IPR008271 GO:0004672|GO:0006468
Acco01g3835 1018 Pfam Protein kinase domain 724 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3835 1018 MobiDBLite consensus disorder prediction 404 515 - -
Acco01g3835 1018 ProSiteProfiles PAS repeat profile. 520 593 IPR000014 -
Acco01g3835 1018 SMART pac_2 320 362 IPR001610 -
Acco01g3835 1018 SMART pac_2 597 639 IPR001610 -
Acco01g3835 1018 FunFam LOV domain-containing protein 509 673 - -
Acco01g3835 1018 CDD PAS 270 359 IPR000014 -
Acco01g3835 1018 MobiDBLite consensus disorder prediction 486 506 - -
Acco01g3835 1018 PANTHER FLIPPASE KINASE 1-RELATED 219 1018 - -
Acco01g3835 1018 ProSitePatterns Protein kinases ATP-binding region signature. 727 750 IPR017441 GO:0005524
Acco01g3835 1018 FunFam Putative LOV domain-containing protein 257 413 - -
Acco01g3835 1018 FunFam Putative LOV domain-containing protein 805 1018 - -
Acco01g3835 1018 FunFam LOV domain-containing protein 720 804 - -
Acco01g3835 1018 SMART pas_2 245 314 IPR000014 -
Acco01g3835 1018 SMART pas_2 522 591 IPR000014 -
Acco01g3835 1018 MobiDBLite consensus disorder prediction 407 441 - -
Acco01g3835 1018 Gene3D PAS domain 509 673 - -
Acco01g3835 1018 ProSiteProfiles PAS repeat profile. 243 314 IPR000014 -
Acco01g3835 1018 CDD STKc_phototropin_like 719 1018 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3835 Acco-ChrAcco01 54086238 54095370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3835 62 1016 AGC Kinase Gene Family AT3G45780 70.224 0.0 1333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Acco01g3835 Pkinase 1.9e-63 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3835 01 54086238 54095370 Acco01g3835 01 54086238 54095370 ECH