Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3832 ATGGGCCCTACTAGCGGCGTCATCGCACGGGCCCTAGTGAATTGTTCGAGACGCTACATTGTCTTGGTGTACCTACGACTGAGAGGGATTATGGGTTGCCTTTGTTTTGCAAAGAAATCAAGCGGAAAATCGCGGGCCAACAACTATAGCCAGAGCGCAAAGCCGGACAATCACACAGATACGGCGAAAGTTGATTTGAATGTGAATGGGAAGAAGGAAGCTCATTCTAAAGATAATCAACTTTCTCTGGACGCGAAGAGATTGAATTTAACGGACAATGGAGACACCAGTGGTAGCACGGCGCAGACTTTTACTTTTGATGAACTTGCAGCAGCGACAGGAAATTTTAGGTCAGATTGCTTTCTGGGAGAAGGAGGGTTTGGCAAGGTTTATAAGGGGCATTTGCAGAGAATAGATCAGGTTGTGGCTATAAAGCAACTTGACCCTAATGGACTTCAAGGAGTTCGGGAATTTGTTGTTGAAGTTTTGACACTTAGTCTAGCAGACCACCCTAATCTTGTGAAATTAATTGGGTTTTGTACTGATGGAGATCAGAGACTATTGGTCTATGAGCACATGCCATTAGGATCTTTGGAGAACCACTTGCATGATCTTCCACCCGGTCGAAAACCACTTGATTGGAACACGAGAATGAAAATAGCAGCTGGAGCTGCCAAGGGCTTGGAGTATTTACATGAGAAAATGAAGCCCCCCGTCATATACCGTGATTTGAAATGCTCAAACATTTTATTAGGCGAGGGATATCATCCCAAGTTATCTGATTTTGGCTTGGCAAAAGTGGGCCCAAGTGGCGATAAGACACATGTTTCAACAAGGGTTATGGGCACATATGGTTACTGTGCTCCAGATTATGCAATGACGGGTCAGTTGACATTCAAGTCAGATATCTACAGCTTTGGAGTTGTTCTTTTGGAGCTCATCACTGGCAGGAAAGCCATTGATGATACTAGACCTGCCAAAGAACAAAATCTGGTTGCATGGGCAAGGCCGTTGTTCAGAGACAGGAGAAAATTCTCCCAAATGGTAGACCCATTGCTTGAAGGCCATTATCCTGTGAGAGGTCTGTACCAAGTTCTAGCTATTGCTGCCATGTGTGTTCAAGAACAGCCTAATATGCGGCCCGTGATAACCGACGTGGTTACCGCATTAAACTACCTTGCCTCCCAGACATATGATCCCCAAAGTCATCATGTACAAAACTCCAAAAGAAGGGATGATGATCAAAGACATCTTGTTCGTGATGGTTCTTCCTCTGATAGATCTACAGACTAG 1293 0.4478 MGPTSGVIARALVNCSRRYIVLVYLRLRGIMGCLCFAKKSSGKSRANNYSQSAKPDNHTDTAKVDLNVNGKKEAHSKDNQLSLDAKRLNLTDNGDTSGSTAQTFTFDELAAATGNFRSDCFLGEGGFGKVYKGHLQRIDQVVAIKQLDPNGLQGVREFVVEVLTLSLADHPNLVKLIGFCTDGDQRLLVYEHMPLGSLENHLHDLPPGRKPLDWNTRMKIAAGAAKGLEYLHEKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDDTRPAKEQNLVAWARPLFRDRRKFSQMVDPLLEGHYPVRGLYQVLAIAAMCVQEQPNMRPVITDVVTALNYLASQTYDPQSHHVQNSKRRDDDQRHLVRDGSSSDRSTD 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3832 430 MobiDBLite consensus disorder prediction 399 430 - -
Acco01g3832 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Acco01g3832 430 MobiDBLite consensus disorder prediction 43 57 - -
Acco01g3832 430 CDD STKc_IRAK 122 391 - -
Acco01g3832 430 Pfam Protein tyrosine and serine/threonine kinase 121 389 IPR001245 GO:0004672|GO:0006468
Acco01g3832 430 SMART serkin_6 116 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3832 430 ProSiteProfiles Protein kinase domain profile. 116 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3832 430 FunFam Serine/threonine-protein kinase PBS1 193 408 - -
Acco01g3832 430 MobiDBLite consensus disorder prediction 43 63 - -
Acco01g3832 430 PANTHER OS07G0668900 PROTEIN 51 404 - -
Acco01g3832 430 MobiDBLite consensus disorder prediction 404 430 - -
Acco01g3832 430 SUPERFAMILY Protein kinase-like (PK-like) 102 404 IPR011009 -
Acco01g3832 430 Gene3D Phosphorylase Kinase; domain 1 88 192 - -
Acco01g3832 430 FunFam probable serine/threonine-protein kinase RLCKVII 89 192 - -
Acco01g3832 430 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Acco01g3832 430 Gene3D Transferase(Phosphotransferase) domain 1 193 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3832 Acco-ChrAcco01 54076035 54079767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3832 73 395 Glycoside Hydrolase AT3G07070 60.991 3.35e-146 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Acco01g3832 PK_Tyr_Ser-Thr 1.2e-42 CL0016