Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3822 ATGATTGCCTCCAAAATGGCACAATTCACTGATAACATTCCGTCAATGGATCTGATGCGCTCGGAGAAGATGACCTTCGCTCAACTCATCATCCCTGTCGAGTCCGCTCACCGGGCCGTCTCTTATTTGGGCGAACTCGGCCTCTTCCAATTCCGAGATTTAAATGATGATAAAAGCCCTTTCCAAAGAACATTTGTTAATCAGGTCAAGCGATGTGCAGAAATGTCAAGAAAGTTACGATTCTTCAAAGATCAAATAAGTAAAGCTGGTCTTATGTCTTCTCCTCATTCTGTTTTGCAACCAGATATTGAGTTGGAGGAATTAGAGTATCAACTTGCTGAGCACGAACATGAGCTAATTGAACAGAACTCTAACAGCGAGAAACTTCGTCAATCATATAATGAGCTCCTGGAGTTTAAGATTGTTTTGCAGAAGGCATTTGGTTTTCTGGCCTCAAATCATAGCCATGAATTTTCAGAGAGGGAGCTGGAGGAGAATTTATACTTAAATGATGGTTATTTTGACACAGGATCTCCACTTGAGAAGGAATTGAAGCCTGGGTCATCATATCAATCTGGTTTAAGATTCATCAGCGGAATGATCTGTAAATCCAAGGTTCTTAAGTTCGAAAGGATGTTGTTTCGAGCTACAAGAGGCAATATGCTTTTCAATCAGGCTGCAGCTGATGAGCTAATAGAGGATCCTGTATCAAATGAGAAGATAGAAAAAACCGTGTTTGTCGTGTTTTTCTCTGGGGAGCAGGCAAGAACAAAAATTCTTAAAATCTGCGAGTCATTTGGTGCAAATTGCTACCCTGTCCCTGAAGATATAAGTAAACAAAGACAAATAAGTAGGGAGGTCTCGACACGCCTTTCTGACTTGGAGACAACTCTGGATGCTGGGATAAGGCACCGGAATAAGGCCCTTGCTTCTGTAGAAGGTCATCTAGCAAAATGGATGCACATGGTAAGAAGAGAGAAGGCTGTGTATGATACCCTGAACATGTTAAATTTTGATGTCACAAAAAAATGCCTCGTTGGAGAGGGTTGGTGCCCTGTTTTTGCAAAATCGCAGATTCAGGAGGCACTGCAGCGTGCAACTTTAGATAGCAGCTCTCAAGTTGGCATAATCTTCCATTCAATGGATGCAGCGGAGTCTCCACCTACATATTTTAGGACCAACCGCTTTACAAGTGCATATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATACGAAGAAGCAAATCCTGCAGTTTACACAGTTATTACATTCCCGTTTCTTTTTGCGGTAATGTTTGGGGACTGGGGTCATGGAATTTGCTTGTTGCTGGGGGCATTGGTTCTTATAGCACGCGAAAGCTGGCTCAGCAAGCAGAGACTTGGAAGCTTTATGGAGATGCTATTTGGTGGGCGTTATGTGCTCCTTTTGATGTCGCTGTTTTCAATCTATTGTGGGGTAATCTACAATGAATTCTTCTCTGTTCCTTTTCACATTTTTGGAAAGTCTGCTTACTCATGCCGAGATGCTTCGTGCAGAGATGCACACACTGCTGGCCTGGTCAAATTACGAGATCCGTATCCATTTGGCGTGGACCCCAGCTGGCGTGGAAGTCGCTCAGAATTGGCTTTTCTCAACTCTCTCAAGATGAAGATGTCCATTCTTTTAGGTGTGGCGCAGATGAACTTAGGGATTATATTAAGTTACTTCAATGCGCGTTATTTTGGCAGCTCAGTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTTCTGAACAGTCTGTTTGGGTATCTTTCTCTTCTCATTGTCGTTAAGTGGTGCAATGGTTCTCAGGCAGACCTCTATCATGTAATGATTTACATGTTTCTTAGCCCTACTGATAATCTTAGTGAGAATCAGTTGTTCAGGGGCCAAAGGCCACTTCAAATTGTGTTATTGCTTTTGGCCTTAATCGCAGTTCCTTGGATGCTGTTTCCAAAACCCTTTATCCTCAAGAAGCTTCACCACGAAAGATTTCAAGGACGCACTTATGGTATGCTAACTACCTCTGAGATGGATCTCGAGGAGGAACCAGATTCTGCCAGGCAACATGATGAGGAATTCGACTTCACTGAGGTCTTTGTTCATCAGATGATCCACTCTATTGAATTTGTTCTAGGCGCAGTTTCAAATACTGCGTCATATCTTCGACTTTGGGCATTAAGCTTGGCCCACTCAGAGCTCTCAACTGTGTTTTATGAGAAAGTACTACTTCTTGCTTGGGGGTATGACAATCTGGTTATCCGGTTAGTGGGCCTAGCCGTTTTTGCCTTTGCAACTGCCTTTATTCTTCTCATGATGGAAACCCTCAGCGCTTTTCTTCATGCCCTGCGTCTCCACTGGGTAGAATTTCAAAATAAATTCTACTATGGTGATGGCTACAAGTTCAGACCCTTTTCCTTTGCCTTGTTAACAGAGGACGATGATTGA 2472 0.4288 MIASKMAQFTDNIPSMDLMRSEKMTFAQLIIPVESAHRAVSYLGELGLFQFRDLNDDKSPFQRTFVNQVKRCAEMSRKLRFFKDQISKAGLMSSPHSVLQPDIELEELEYQLAEHEHELIEQNSNSEKLRQSYNELLEFKIVLQKAFGFLASNHSHEFSERELEENLYLNDGYFDTGSPLEKELKPGSSYQSGLRFISGMICKSKVLKFERMLFRATRGNMLFNQAAADELIEDPVSNEKIEKTVFVVFFSGEQARTKILKICESFGANCYPVPEDISKQRQISREVSTRLSDLETTLDAGIRHRNKALASVEGHLAKWMHMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPVFAKSQIQEALQRATLDSSSQVGIIFHSMDAAESPPTYFRTNRFTSAYQEIVDAYGVARYEEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALVLIARESWLSKQRLGSFMEMLFGGRYVLLLMSLFSIYCGVIYNEFFSVPFHIFGKSAYSCRDASCRDAHTAGLVKLRDPYPFGVDPSWRGSRSELAFLNSLKMKMSILLGVAQMNLGIILSYFNARYFGSSVDIRYQFVPQMIFLNSLFGYLSLLIVVKWCNGSQADLYHVMIYMFLSPTDNLSENQLFRGQRPLQIVLLLLALIAVPWMLFPKPFILKKLHHERFQGRTYGMLTTSEMDLEEEPDSARQHDEEFDFTEVFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYYGDGYKFRPFSFALLTEDDD 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3822 823 Coils Coil 103 132 - -
Acco01g3822 823 Pfam V-type ATPase 116kDa subunit family 42 815 IPR002490 GO:0033179|GO:0046961|GO:1902600
Acco01g3822 823 PIRSF ATP6V0A1 14 823 IPR026028 GO:0000220|GO:0046961
Acco01g3822 823 PANTHER VACUOLAR PROTON ATPASES 18 822 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3822 Acco-ChrAcco01 53993948 54002198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3822 6 818 Primary Pumps ATPases(2) AT2G28520 78.213 0.0 1322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3822 01 53993948 54002198 Acco08g0232 08 1705752 1714344 CCT
Acco01g3822 01 53993948 54002198 Acco01g3822 01 53993948 54002198 ECH