Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3807 ATGGAAATTGATCTGAACCATGCAGTGAACGAGGTTGAAAAGAATGCCTTCTGTGATGGGCACTGTCAGCAAGGCGCCTGTGCTTCATGTTTCCACTCTTCCACTTCTCCATCTTCCAATTCGCCTTCACCTCGTGGGTCTTCTTCTTATCTTGAACTCTGGCATGCTTGTGCTGGCCCCCTTACCTGCCTCCCTAACAAAGGAAATGTAGTAGTCTACTTTCCCCAAGGTCATCTTGAACAGCTTGCCTCTTTCTCTCCTTTCTCCCCCATGGACATGCCCACCTATGACCTTCAACCACAAATATTCTGCAGGGTCGTCAATGTCCAGCTTCTTAGTATTTGTTGTTTCCCGGAACAGGCCAACAAGGAGAATGATGAGGTTTATACGCAGGTTACTTTGCTGCCCCAGGCAGAGTTAGCAGGGGTGAACTTGGAGGGCCAAGAACTTGAGAAATTGGGAGCATATGAGGAGGAAAATGGAGGATTACCTGCAAAATCAACCCCTCACATGTTCTGCAAAACTCTTACTGCTTCTGATACTAGCACTCACGGGGGTTTCTCTGTTCCTCGCAGAGCTGCTGAGGACTGCTTTCCTCCTTTGGATTATAAGCAGCAAAGACCCTCCCAAGAGCTTGTTGCAAAAGACCTGCATGGAGTAGAGTGGAAATTCCGCCATATTTATAGAGGTCAGCCAAGACGGCATCTGCTCACAACTGGCTGGAGTATTTTTGTCAGCCAAAAGAATCTTGTATCTGGCGATGCAGTACTATTTCTGAGGGGTGAAAGTGGAGAACTGAGGTTGGGAATCAGGAGATCTGTTCGACCTAGAAATGGTCTTCCCGAGTCAGTTATTGGTGATCAGAATTGCTATCCCAATTTCCTATCTTCAGTGGCTAATGCTATAACCACGAAAAGCGTGTTTCATGTTTTCTACAGCCCAAGGGCAAGTCATGCAGAGTTTGTTGTCCCCTACCAGAAATATGTCAGAACCATCAAGAATCCAATGACCATTGGGAGTAGATTTAAGATGAAATTTGAAATGGATGAATCTCCCGAAAGAAGGTGTAATGGCGGTATAGTGACTGGAATGCGTGATTTGGATCCCTATAGATGGCCTAAATCAAAATGGAGGTGCTTGATGGTAAGATGGGATGAGGATATTGCTACTAATCACCAAGATCGAATTTCTCCATGGGAGATTGAGCCTTCTGTTTCTCTCCCACCCTTGAGCATTCAGTCGTCCCCAAGACTAAAGAAATTGCGGCAAGGTCTGCAAGCTACTACATCAAGTCACCTCATGACCGGTGGCAGTGCATTTATGGACTTTGAGGAGTCTGTAATGTCACCCAAGGTCTTGCAAGGTCAAGAAAATACAGGTTTTGCATCATACTATTTTGGGCGTGATGCAGTGACCAACCAGCCAGATTTTGAGATGAGTCCTCTTAGTCATCCAAATCTTGCATCCACTGGTTTAAGAAAGGCTACTGCTGCTGAACTTATGAGGGTTCACCCTTCTAGTTATGCAGGCTTTGCGGAGACTAATAAGTTTCTGAGGGTCTTGCAAGGTCAAGAAATATGTCCACTGCAATCCCTGAAAGGAAAGGCTGATTTTAACCTTGGCGTTTGGGGTAAACCCAATGCCAGTTGCACAACTTTCAACCAACGTCAGGCATCCAAACCCAACTTCAACAGTTTAGGATCAGAAGGCCTTCAAACCGCTTATTTTCCTTACGGTGACATCCACCGAGCTGGTCAAAGTAGCCTGTTGTGTTCTAGACCTGCAAATTTCCAGAGAGAGAATGTCCACACTCCTTCCACTCAGGCAGAGCTCTCAACAAAGGAAGTCGGACGGTCAGATCCCTCAAACAAGGATAAGCTGCAGGACAGTTTTTCTGCTGCTGCTTCTTTAGGAGCAACTCTAAGGATTCCAAATGATGAAACTTTTGAGGGGAAGGTGAATGCCTGTAAACTATTTGGGTTCCCCTTATCTGGGGAAGGCAACTCCCAGAATTTACAGAGCTCTGCTAAAAGGAGTTGCACAAAGGTTCACAAGCAAGGTAGCTTAGTTGGAAGAGCCATTGATCTCTCAAGACTTAGCAGCTACAATGATCTGTCGAGTGAACTAGAGCGACTGTTTGGCATGGAAGGCCTTATAAAGGATCCTGATAAAGGATGGAGGGTCCTGTACACCGATAGTGAAAATGATATAATGGTTGTAGGGGATGACCCATGGCATGAGTTCTGCTGCGTGGTGTCTAAGATCCATATATATACCCAAGAAGAAGTGGAGAAGATGACCATTGGGATGATCACTGATGATACCCAGAGCTGTTTAGAACAAGCACCGGGAGTAATGGAGGCTTCCAAGTCGTCATCTGTGGGCCAGCCTGATTCTTCTCCGACAGGAGCCTGA 2415 0.4609 MEIDLNHAVNEVEKNAFCDGHCQQGACASCFHSSTSPSSNSPSPRGSSSYLELWHACAGPLTCLPNKGNVVVYFPQGHLEQLASFSPFSPMDMPTYDLQPQIFCRVVNVQLLSICCFPEQANKENDEVYTQVTLLPQAELAGVNLEGQELEKLGAYEEENGGLPAKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGESGELRLGIRRSVRPRNGLPESVIGDQNCYPNFLSSVANAITTKSVFHVFYSPRASHAEFVVPYQKYVRTIKNPMTIGSRFKMKFEMDESPERRCNGGIVTGMRDLDPYRWPKSKWRCLMVRWDEDIATNHQDRISPWEIEPSVSLPPLSIQSSPRLKKLRQGLQATTSSHLMTGGSAFMDFEESVMSPKVLQGQENTGFASYYFGRDAVTNQPDFEMSPLSHPNLASTGLRKATAAELMRVHPSSYAGFAETNKFLRVLQGQEICPLQSLKGKADFNLGVWGKPNASCTTFNQRQASKPNFNSLGSEGLQTAYFPYGDIHRAGQSSLLCSRPANFQRENVHTPSTQAELSTKEVGRSDPSNKDKLQDSFSAAASLGATLRIPNDETFEGKVNACKLFGFPLSGEGNSQNLQSSAKRSCTKVHKQGSLVGRAIDLSRLSSYNDLSSELERLFGMEGLIKDPDKGWRVLYTDSENDIMVVGDDPWHEFCCVVSKIHIYTQEEVEKMTIGMITDDTQSCLEQAPGVMEASKSSSVGQPDSSPTGA 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3807 804 MobiDBLite consensus disorder prediction 600 616 - -
Acco01g3807 804 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 49 767 IPR044835 GO:0003677|GO:0006355|GO:0009725
Acco01g3807 804 FunFam Auxin response factor 335 408 - -
Acco01g3807 804 SUPERFAMILY CAD & PB1 domains 681 757 - -
Acco01g3807 804 FunFam Auxin response factor 673 767 - -
Acco01g3807 804 CDD B3_DNA 170 272 IPR003340 GO:0003677
Acco01g3807 804 ProSiteProfiles B3 DNA-binding domain profile. 172 274 IPR003340 GO:0003677
Acco01g3807 804 Pfam B3 DNA binding domain 172 273 IPR003340 GO:0003677
Acco01g3807 804 MobiDBLite consensus disorder prediction 600 627 - -
Acco01g3807 804 Gene3D - 673 767 - -
Acco01g3807 804 MobiDBLite consensus disorder prediction 784 804 - -
Acco01g3807 804 MobiDBLite consensus disorder prediction 786 804 - -
Acco01g3807 804 Pfam AUX/IAA family 672 762 IPR033389 -
Acco01g3807 804 SUPERFAMILY DNA-binding pseudobarrel domain 164 282 IPR015300 -
Acco01g3807 804 Gene3D - 170 274 IPR015300 -
Acco01g3807 804 SMART B3_2 172 274 IPR003340 GO:0003677
Acco01g3807 804 Pfam Auxin response factor 298 380 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Acco01g3807 804 Gene3D - 336 408 - -
Acco01g3807 804 ProSiteProfiles PB1 domain profile. 678 762 IPR000270 GO:0005515
Acco01g3807 804 FunFam Auxin response factor 170 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3807 Acco-ChrAcco01 53896726 53902207 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3807 46 802 B3 DNA Binding Superfamily AT5G60450 60.131 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Acco01g3807 B3 1.3e-21 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3807 01 53896726 53902207 Acco01g3807 01 53896726 53902207 ECH