Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3802 ATGGAAGGAGAATACCAAACTGGGTCTATGTTTCCCCCTGGATTCAGGTTCCATCCTTCTGATCAAGAACTCATAATTCATTACTTAAAAAATAAAATAACCTCTCGTCCACTTCCAGCATTGATTATTGCAGAAATTGATCTGTACAAGTTTAACCCATGGGAGTTACCCAAAAAGGCATTGTTTGGGGAGGACGAATGGTATTTCTTTAGCCCTAGAGACCGAAAGTACCCAAATGGATTGAGACCAAACAGAGCAGCAGCTTCAGGATATTGGAAGGCTACTGGTACAGACAGGCCTATACTGGGCTCTTGCGGATCAAAGCGCATAGGAGTGAAGAAAGCTCTTGTTTTTTACACAGGTCGCCCTCCTAGAGGGGCTAAGACTGATTGGATTATGAATGAATACAGATTGACAGACACAATCACCAAACCTTCCGGGCTTAAAGGTTCCATGCGACTGGATGACTGGGTGCTATGTCGGGTTCGACACAAAGGCTACTCATCAAGGAATTCTGGTGAGAATCAGGAGCATCATTTTGGACCAAGCTTGCAGGCAAACCTTGCTGGCTGCAACCAATTCCCAAGAAACACGGACCTTGGAGCTACCATGTTCACAAATCATCAGTACAAAGACTATCGAATCTTAGCCTCTATTCTTGTTGGCGAACCTGTACTTCCCATAGAGAACAGGTCAGGTGTGAGCTTTGAAGGCAGCAAAGGCGACAGCCTCAGTTCAGTGTACAGCTCCTTCGACACCTTGAATACAAAATCTAATGAAGATAATCAATACGACAATCTCATTTCTTTTAATGGGGAGTTTCACTTTGAGAACAAAATAGATCATCTTACTAGCAAGGTGTTGGCGAGTAGTGACATGTACTGCTATAGTCGAAATCAGTCTCAAGATGGCATCCTCAAGGAGATTCCACCAGATACTACCATCAATTTTGAAGAACTTAACAAATTGGCCTCCACAGAAAGACACTCACCGGAAATAGGATTGCTTTTCAGGATGCAGAAAAGTCGTTATTCTACGTCTCCTTAACTTTTTGTGAAGAACTATAACAGAACGAAAAAGACGACACAGATAGATTTCTATAGAACGGCAGAAAACTGGCTTTCTTTAACAGTGAGGAGATCCAACTGTTCCAAAATTAACAAGATTGAAAGCTAG 1176 0.4243 MEGEYQTGSMFPPGFRFHPSDQELIIHYLKNKITSRPLPALIIAEIDLYKFNPWELPKKALFGEDEWYFFSPRDRKYPNGLRPNRAAASGYWKATGTDRPILGSCGSKRIGVKKALVFYTGRPPRGAKTDWIMNEYRLTDTITKPSGLKGSMRLDDWVLCRVRHKGYSSRNSGENQEHHFGPSLQANLAGCNQFPRNTDLGATMFTNHQYKDYRILASILVGEPVLPIENRSGVSFEGSKGDSLSSVYSSFDTLNTKSNEDNQYDNLISFNGEFHFENKIDHLTSKVLASSDMYCYSRNQSQDGILKEIPPDTTINFEELNKLASTERHSPEIGLLFRMQKSRYSTSPXLFVKNYNRTKKTTQIDFYRTAENWLSLTVRRSNCSKINKIES 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3802 391 Gene3D NAC domain 20 168 IPR036093 GO:0003677|GO:0006355
Acco01g3802 391 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
Acco01g3802 391 FunFam NAC domain-containing protein 72-like 20 170 - -
Acco01g3802 391 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Acco01g3802 391 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 261 - -
Acco01g3802 391 SUPERFAMILY NAC domain 8 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3802 Acco-ChrAcco01 53873490 53876198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3802 11 174 NAC Transcription Factor Family AT1G61110 69.186 6.96e-82 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco01g3802 NAM 2.2e-37 No_clan