Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3796 ATGTCGAAAGCAGGAAACCGAATGAGCAATGGGCGAAGCTCAAAAACAGCGAGTAAAGCAAGTAAGCCTCGAAAAGAGGGCTTGACGAAGACGAGTAAACGCGGCGATAGCAATGTGAGGGACGATAAAGTTTCAATCTTTCCGTCATCTACTATTACCACCGAGTTCTTAGAAGGAGGGAAACGGCCTGAAATTGACGACAATGGGGCCGCGAATGGGCGAACCAACGGAGCGAGACCCAAGAAAAGTAAACGGAAGCAACAAGATGACGATTATAAAGTTGAAGAGAAAGAAAACGCAGAAACGAATGAGCTTCCGATGAGTCGAATCAAGAGAATAATGAAGGCAGAAGATCCCGAGCTACGTGTTTCTGAGGAAGCCATCTTTGTCATCAGCAAAGCCGCAGTGAAATTCCTTAGACAATTCACGCGGGAATCTCATCCTTGTTCAGTTCAGGATCGAAAGAAATTTCTTGGTTACCAGCGACTGTCCGACGTTGTTAGTAAGCAGAGGAGATATGACTTTCTTTTAGACTATGTCCCTGAGAAACTAAAAGCTGAGGATGCATTAAGAAAGATAGCAGCAATTGGGAGGATCTGA 600 0.45 MSKAGNRMSNGRSSKTASKASKPRKEGLTKTSKRGDSNVRDDKVSIFPSSTITTEFLEGGKRPEIDDNGAANGRTNGARPKKSKRKQQDDDYKVEEKENAETNELPMSRIKRIMKAEDPELRVSEEAIFVISKAAVKFLRQFTRESHPCSVQDRKKFLGYQRLSDVVSKQRRYDFLLDYVPEKLKAEDALRKIAAIGRI 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3796 199 Gene3D Histone, subunit A 71 182 IPR009072 GO:0046982
Acco01g3796 199 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 84 190 - -
Acco01g3796 199 MobiDBLite consensus disorder prediction 1 17 - -
Acco01g3796 199 SUPERFAMILY Histone-fold 87 182 IPR009072 GO:0046982
Acco01g3796 199 MobiDBLite consensus disorder prediction 82 103 - -
Acco01g3796 199 MobiDBLite consensus disorder prediction 1 103 - -
Acco01g3796 199 MobiDBLite consensus disorder prediction 19 41 - -
Acco01g3796 199 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 104 164 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3796 Acco-ChrAcco01 53840617 53842761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3796 68 164 CCAAT-HAP5 Transcription Factor Family AT1G07980 32.000 5.94e-14 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Acco01g3796 CBFD_NFYB_HMF 7.6e-12 CL0012