Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3792 ATGCATCAAGAAGGTGATCTTCTTGCAGAAATTAAACCGTGGTTGGAAAAAGATTGGGATGCGAATTTGGTCTGGTGTAGCAGGCATGCTAATCGTTTGGCTGAAGAAGCTCATGAGCTCGCATATGGTTTTCATTTGTTTAATGGTTGTATTTTTTCGCCTGTTCCGGATTATGCAAAAGGTCAACGAAGAATCGGTGGAAGGTTGGGGGCTGATCCTGCAAGGATCAGCCAAGAACGTAATTTTCACATAATAAAGCTTGTTCAGTCGAGAGTACGGCGACGGCTTACAGTTCTAAGTCTAACCACCAGATTTTCAATAGGATTTTTTCTTTTGCTTAGATGGGTTGTTGTAACTGCTTCTGGTTCATCCGAAGATCTAAACAGCTCAGTGCTAAGTTTGGTAATCAATGGTAATCTCTCTCAGGAGCTGTTGTTGGATGAAGACATCGAAGACGATGGCTCATATGATGGTGATGTTACTAACATCAGCAGTGGAGATGATAATGAAGTACAAAGTCATGCCAACCGGTCTGAGGATATTTTGAAATGGAGAGCAGAGAATGACATGATTTGTAGGCAGTTTCCTGTTCAGGAAACTCACAAAGTTGTTCGCACAGAGGATGAAAATGGAAACAAGATGATCAATGAGTATGTTCGTAAATATAAGATAGGTTCTCGTAGCTACGGGAAAGTGGTTTTATATCAAAGTTCTGTCGATGGCAAGCACTATGCAATCAAGGTAAGGACTGTTTATGGTGTGGTGAGGCTGTTGATTACTGCAGTAGCAAATAGGCCATTGGTTTTTCACAAGTCTCATTTACTGAAGGTTCGAGTTGCAGCCTCAGAGACTGCCATGACAGATGTTCTGCGCGAGGTTGTTGTTTTACATTTATTATACGTTGTTTTGCCATCCCTAAAGTGGTTTGACGACACTAGTACTTTCTTTCCAGTTCTTGGATATGTTGAAGGCAAATGGGTCTGTGAGGGTACAGGACCTATTTGTGGCTTAGGTGAAGAGACTGCTAGGAGATATTTGCGTGACATTGTTTCAGGATTAATGTATCTTCATGATCATGATGATAATGATGAACTTCGTGGTCCCCTGGTACTCCTGTTTTCACTGCACCAGAATGTTGTTTGGGTTAGAATTATCTTTCCAAACTTGCAGATTACTATCCTCATTTGCTGTGTAGAGTCCATGACAGTACATGTTCTCGTTCCTTTTTTCTGTTCATGTTCTTTAGGTCTTACCTATCGTGGTAGAGCTGCAGACACATGGGCAGTAGGAGTTACTTTGTACTGTATGATCCTTGGTGAATATCCTTTTCTAGGTGATACTCTTCCAGATACTTACGATAAAATAGTCAATAACCCTTTAGTCCTCCCGGATAATTTGAACCTGCAATTGAAGAACTTGCTAGAAGGACTACTTTGCAAAGATCCAGAACTAAGGTTGACATTAGGTGATGTTGCAAACCATAGCTGGTTTATAGGAGACGATGTGCCAATTCCTGAGTACTTGTGTTGGTGTAAACGCAAGACCTTGGAGAGGGAAGACTTAGATGGGAGCAACATACTTACTTGA 1587 0.4127 MHQEGDLLAEIKPWLEKDWDANLVWCSRHANRLAEEAHELAYGFHLFNGCIFSPVPDYAKGQRRIGGRLGADPARISQERNFHIIKLVQSRVRRRLTVLSLTTRFSIGFFLLLRWVVVTASGSSEDLNSSVLSLVINGNLSQELLLDEDIEDDGSYDGDVTNISSGDDNEVQSHANRSEDILKWRAENDMICRQFPVQETHKVVRTEDENGNKMINEYVRKYKIGSRSYGKVVLYQSSVDGKHYAIKVRTVYGVVRLLITAVANRPLVFHKSHLLKVRVAASETAMTDVLREVVVLHLLYVVLPSLKWFDDTSTFFPVLGYVEGKWVCEGTGPICGLGEETARRYLRDIVSGLMYLHDHDDNDELRGPLVLLFSLHQNVVWVRIIFPNLQITILICCVESMTVHVLVPFFCSCSLGLTYRGRAADTWAVGVTLYCMILGEYPFLGDTLPDTYDKIVNNPLVLPDNLNLQLKNLLEGLLCKDPELRLTLGDVANHSWFIGDDVPIPEYLCWCKRKTLEREDLDGSNILT 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3792 528 Gene3D Transferase(Phosphotransferase) domain 1 405 519 - -
Acco01g3792 528 SUPERFAMILY Protein kinase-like (PK-like) 213 517 IPR011009 -
Acco01g3792 528 SMART serkin_6 218 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3792 528 Gene3D Transferase(Phosphotransferase) domain 1 191 362 - -
Acco01g3792 528 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 181 499 - -
Acco01g3792 528 ProSiteProfiles Protein kinase domain profile. 218 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3792 528 Pfam Protein kinase domain 419 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3792 Acco-ChrAcco01 53823155 53829260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3792 214 504 CBL-interacting serine-threonine protein kinases AT4G24400 24.497 5.81e-15 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Acco01g3792 Pkinase 5.6e-10 CL0016