Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3784 ATGTCTAGTCGGCGGCACGTCGTTGTAGTTTCGCTTACTACTCTTCTCCTCATCTCATTGTTCGCTCTGTCTTCGTGTAAGACGGTCGAAAATGTCGATGATGAAGATCTCAGCTTTCTTGAAGAAGCTGATGAAAGCTCTCCTTCACATTACCCCTACCCAGATCCGGCCCATTCCGACGAGGAAGATGGTTCCTACGACGATGATTTCGGTGACTTCCCTAGCCACGACGAGTCGGGGGCCAATCGAGAGGCTTACAAACAACCAGAGGTGGATGATAAGGACGTCGTCGTTTTGAAGGAGAGGAATTTTAGTGATGTTGTGGAAAATAATCGGTTTGTGATGGTGGAATTCTACGCTCCCTGGTGTGGTCACTGCCAGGCTTTGGCGCCAGAATACGCCGCCGCGGCGACGGAGTTGAAGTCTGAGAATGTGGTTTTGGCGAAGGTTGATGCAACGGAGGAGAACGAATTAGCCCATGAGTACGATGTTCAGGGGTACCCCAGTGTCATCTTTTTCGTCGATGGGGTTCACAAGCCTTACACTGGTCAGAGAACCAAAGATGCCATAGTGACCTGGATTAAGAAGAAGATAGGACCTGGTATATACAATATAACAACATTGGATGACGCTGAACGCATATTGACCTCTGAAAGCAAAGTAGTTTTGGGCTTCCTCGACTCTTTAGTTGGTTCTGAAAGTGAGGAGCTAGCTGCTGCTTCAAGACTTGAGGATGATGTAAATTTTTATCAAACCGTGAATCCTGATGTGGCAAAGCTTTTCCATATAGATCCAAATGTTAAACGCCCTGCTTTGGTCCTTCTCAAGAAAGAGGAGGAGAAGTTAAACCATTTTGACGGTGAATTTGTAAAATCTAAAATATCGGACTTTATATTGGCGAACAAACTTCCTTTGGTCACAACTTTTACGAGAGAAAATGCCCCCTCAATATTTGAAAGTTCAATCAAGAAACAGTTGCTGCTGTTTACAACTTCAAATGATTCAAAGAAGTTTGTCCCCGTATTCCAAGAAGCAGCAAAGTTTTTCAAGGGAAAGCTAATCTTTGTACATGTGGAAATGGATAATGAAGATGTTGGAAAGCCTGTTGCCGATTATTTTGGTATCCCTGGAAATGCTCCCAAAGTACTTGCATACACAGGAACAGATGATGGGAAGAAATTTGTTCTTGGAGAGGTGACTGGAGACAAAATAAAGGCATTTGGGGAAGATTTCCTTGAAGACAAGCTAAAACCTTTTTATAAATCTGATCCTGTTCCTGACAGTAATGATGGTGATGTAAAAATAGTTGTTGGGGATAATTTTGATGAAATTGTATTGGATGAGTCAAAGGATGTCCTCCTTGAGATTTATGCACCCTGGTGTGGCCATTGCCAAGCATTGGAACCAACATACAACAAACTGGCAAAACATCTGCGTGGCATTGAGTCTCTAGTAATAGCCAAGATGGATGGAACAACAAATGAGCACCCAAGGGCAAAGGCTGATGGATTCCCTACTCTTCTCTTCTTCCCAGCAGGGGACAAGACTTCTGATCCTGTTACTGTTGATGCAGATCGTTCCGTGGTGGCCTTGTATAAATTCCTCAGAAAACATGCATCAATCCCATTCAAGCTCGAGAAACCAGCCTCAACTCCGAAACCCGAGAGTCCAGACGCCAAGGAGAATCAGAGTAGCAGCAGCGACGTGAAAGATGAATTATGA 1722 0.4413 MSSRRHVVVVSLTTLLLISLFALSSCKTVENVDDEDLSFLEEADESSPSHYPYPDPAHSDEEDGSYDDDFGDFPSHDESGANREAYKQPEVDDKDVVVLKERNFSDVVENNRFVMVEFYAPWCGHCQALAPEYAAAATELKSENVVLAKVDATEENELAHEYDVQGYPSVIFFVDGVHKPYTGQRTKDAIVTWIKKKIGPGIYNITTLDDAERILTSESKVVLGFLDSLVGSESEELAAASRLEDDVNFYQTVNPDVAKLFHIDPNVKRPALVLLKKEEEKLNHFDGEFVKSKISDFILANKLPLVTTFTRENAPSIFESSIKKQLLLFTTSNDSKKFVPVFQEAAKFFKGKLIFVHVEMDNEDVGKPVADYFGIPGNAPKVLAYTGTDDGKKFVLGEVTGDKIKAFGEDFLEDKLKPFYKSDPVPDSNDGDVKIVVGDNFDEIVLDESKDVLLEIYAPWCGHCQALEPTYNKLAKHLRGIESLVIAKMDGTTNEHPRAKADGFPTLLFFPAGDKTSDPVTVDADRSVVALYKFLRKHASIPFKLEKPASTPKPESPDAKENQSSSSDVKDEL 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3784 573 FunFam Protein disulfide-isomerase 85 197 - -
Acco01g3784 573 CDD PDI_a_PDI_a'_C 433 535 - -
Acco01g3784 573 ProSitePatterns Thioredoxin family active site. 453 471 IPR017937 -
Acco01g3784 573 CDD PDI_b'_family 313 412 - -
Acco01g3784 573 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Acco01g3784 573 ProSitePatterns Thioredoxin family active site. 115 133 IPR017937 -
Acco01g3784 573 SUPERFAMILY Thioredoxin-like 429 540 IPR036249 -
Acco01g3784 573 MobiDBLite consensus disorder prediction 545 573 - -
Acco01g3784 573 FunFam Protein disulfide-isomerase 303 427 - -
Acco01g3784 573 Gene3D Glutaredoxin 201 302 - -
Acco01g3784 573 NCBIfam protein disulfide-isomerase 94 573 IPR005792 GO:0003756
Acco01g3784 573 CDD PDI_b_family 202 301 - -
Acco01g3784 573 PRINTS Thioredoxin family signature 122 131 - -
Acco01g3784 573 PRINTS Thioredoxin family signature 114 122 - -
Acco01g3784 573 PRINTS Thioredoxin family signature 163 174 - -
Acco01g3784 573 ProSiteProfiles Thioredoxin domain profile. 77 199 IPR013766 -
Acco01g3784 573 SUPERFAMILY Thioredoxin-like 89 199 IPR036249 -
Acco01g3784 573 FunFam protein disulfide-isomerase A2 198 302 - -
Acco01g3784 573 PANTHER PROTEIN DISULFIDE ISOMERASE 22 572 - -
Acco01g3784 573 Pfam Thioredoxin 433 520 IPR013766 -
Acco01g3784 573 Pfam Thioredoxin 96 196 IPR013766 -
Acco01g3784 573 ProSiteProfiles Thioredoxin domain profile. 411 540 IPR013766 -
Acco01g3784 573 Pfam Thioredoxin-like domain 237 407 - -
Acco01g3784 573 NCBIfam protein disulfide-isomerase domain 100 197 IPR005788 GO:0003756
Acco01g3784 573 Gene3D Glutaredoxin 303 426 - -
Acco01g3784 573 MobiDBLite consensus disorder prediction 69 87 - -
Acco01g3784 573 CDD PDI_a_family 97 194 - -
Acco01g3784 573 Gene3D Glutaredoxin 79 200 - -
Acco01g3784 573 SUPERFAMILY Thioredoxin-like 301 430 IPR036249 -
Acco01g3784 573 MobiDBLite consensus disorder prediction 39 87 - -
Acco01g3784 573 SUPERFAMILY Thioredoxin-like 203 313 IPR036249 -
Acco01g3784 573 Gene3D Glutaredoxin 427 541 - -
Acco01g3784 573 FunFam Protein disulfide-isomerase 428 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3784 Acco-ChrAcco01 53782086 53785906 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3784 01 53782086 53785906 Acco08g0274 08 2048365 2059244 CCT
Acco01g3784 01 53782086 53785906 Acco01g3784 01 53782086 53785906 ECH