Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3763 ATGAAGCTGCAATTCAAAGTTGCCCTGGCTTTTGGTATTAGCTTGCTCTGGATTCAGTCCTCATTCTGTGGAGGACCTTCTGGGAGCCTAAACAAATGGATATGTAGATGTTCTTTTCAAGAAAACCAGAGTTCCTCTCTTGCTAACTGTTCTACATCATGTGATTGCCGTTTAGATGCCAGAGAGAGTGAATCCTTATGGACATGCTTATGTGACCCCGACGGTTTTCCTAATGTGGAAGAAGATGGTCATAGTTCAAATTGCTTTACTGCCTGCAACTGCACCTGGGGAGCTCTCATCATCTCACGAGGTTCAAAGAAACACATCTCCAGCAAGATCGTCATAATTATACTATTATTATGTGTTATATGCACAACTGTTGCATTTCTTGCCTCAATCACATGCTATGCATACCGAAGGGACAAGTGTCCTATTCAATCACCCACATTCTCATCAGACAACGAAACAAGTTACAATAGCACCGCCATCTTAATTAGTAATAGAACCTCAGTGCCAGAAACAAAAGCTACTACAAATTCTCCTAGTAATCTGATCTCAGGATGTTTTCAGATGGCCTCTTTCTTGTGTGGGAGAAAAGGAGAAACCTTTCATGGAAATATTATTCAATTTTCATTTTCTGTACTAGAAAATGCCACTGAAAATTTTTCAGCTTCCAACCTGATTGGACTGGGCAGAAGTAGTTATGTATATCGTGGTAGACTGAAGAGTGGTATTAATGTGGCAGTGAAGCGACTAAAAGCTCAAGGGGGGACTGAAGCAGACTCTGAGTTTTTGACAGAGATTGAACTACTATCTAGACTTCATCATTGTCACCTGGTGCCTTTGCTTGGGTACTGCTTAGAATCAAAAGGAAAACATGTTGAAAGGTTACTTGTATTGAAATACATGGCCAATGGTAATTTGAGGGACTGTTTGGATGGAGTTTCTGGGAAAAGTCCGGATTGGGCTACACGTGTTACAGTGGCAATGGGAGCTGCAAGGGGATTGGAATACCTACATGAAGCAGTTGCTCCAAGAATTATGCATAGAGATATTAAATCAACAAACATTCTTCTGGATGAAAATTATCAAGCCAAAATTACCGATCTTGGTATGGCTAAAAACTTAAGAAATGATGACTTCCCCAGCTGTTCAAATTCTCCAGCTAGAATGCAAGGCACATTTGGTTATTTTGCACCTGAGTATGCAATTGTTGGAAAAGCCTCTCTTAAGTCGGACATCTTCAGTTTTGGGGTGGTTCTTCTTGAGATTATCAGTGGTCGTCAACCTATCTATAAATCTAAAGGCAAAGAAGAAAGCCTTGTCATATGGGCTGCTCCTCTCTTACAAGATAAAAGACGCATAATAACCGAGTTAGCTGACCCACAATTAAAAGGAAACTTCCCGCAAAAAGAGATGCAGATAGTGGCATATTTAGCAAAGGAGTGTTTGCTGTTGGATCCTGAGACTCGACCAACCATGAGTGAAGTCGTTCAGATTCTTTCAACTATATCGCCAGACAAATCTAAAAGGACAAGAAACATTCCATCGAACCTTTTCCAGGAGCCAAGGAATTCAGAGAAGCTAGAGCAAGTTCCATCTAGCAGAGTAGATATTGACCACAATCTTTGGATTGGAAGCTTTAATAATGAAGCAGATATAGTTTCTGCCAAGTATATGGATAGTTTGGTCCTCGTGACTTCAAAAGCTGAGAGCTGGTATGGATCAGAGGAAGAAATTGTTGACCTAACTGAGCCTCGGTATGAATCATTTTGCATGACAAGCACACGTGACAACATTCGCATCCTGTGTGTGATGGATCGACCTCCTCCGCCTCCTCCGGCAGCAGCACCCCTCCTCGGTCCGGCTTCCTTTGATGGAGGATTCTTGGATTCGTGCTTATGGTTTCTGACCTGCTGTGGTCTGTTTAGTTGTTGTTGTCCTCCCCTCTTTGAACCAGGGCCTCCTCCCCCTTAG 1977 0.4219 MKLQFKVALAFGISLLWIQSSFCGGPSGSLNKWICRCSFQENQSSSLANCSTSCDCRLDARESESLWTCLCDPDGFPNVEEDGHSSNCFTACNCTWGALIISRGSKKHISSKIVIIILLLCVICTTVAFLASITCYAYRRDKCPIQSPTFSSDNETSYNSTAILISNRTSVPETKATTNSPSNLISGCFQMASFLCGRKGETFHGNIIQFSFSVLENATENFSASNLIGLGRSSYVYRGRLKSGINVAVKRLKAQGGTEADSEFLTEIELLSRLHHCHLVPLLGYCLESKGKHVERLLVLKYMANGNLRDCLDGVSGKSPDWATRVTVAMGAARGLEYLHEAVAPRIMHRDIKSTNILLDENYQAKITDLGMAKNLRNDDFPSCSNSPARMQGTFGYFAPEYAIVGKASLKSDIFSFGVVLLEIISGRQPIYKSKGKEESLVIWAAPLLQDKRRIITELADPQLKGNFPQKEMQIVAYLAKECLLLDPETRPTMSEVVQILSTISPDKSKRTRNIPSNLFQEPRNSEKLEQVPSSRVDIDHNLWIGSFNNEADIVSAKYMDSLVLVTSKAESWYGSEEEIVDLTEPRYESFCMTSTRDNIRILCVMDRPPPPPPAAAPLLGPASFDGGFLDSCLWFLTCCGLFSCCCPPLFEPGPPPP 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3763 658 Gene3D Transferase(Phosphotransferase) domain 1 303 523 - -
Acco01g3763 658 SMART serkin_6 222 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3763 658 ProSitePatterns Protein kinases ATP-binding region signature. 228 250 IPR017441 GO:0005524
Acco01g3763 658 Pfam Protein tyrosine and serine/threonine kinase 225 501 IPR001245 GO:0004672|GO:0006468
Acco01g3763 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 347 359 IPR008271 GO:0004672|GO:0006468
Acco01g3763 658 ProSiteProfiles Protein kinase domain profile. 222 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3763 658 CDD STKc_IRAK 228 501 - -
Acco01g3763 658 PANTHER OS01G0750732 PROTEIN 68 512 - -
Acco01g3763 658 SUPERFAMILY Protein kinase-like (PK-like) 203 501 IPR011009 -
Acco01g3763 658 Gene3D Phosphorylase Kinase; domain 1 197 302 - -
Acco01g3763 658 FunFam receptor-like serine/threonine-protein kinase NCRK 196 302 - -
Acco01g3763 658 FunFam receptor-like serine/threonine-protein kinase NCRK 303 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3763 Acco-ChrAcco01 53671722 53676343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3763 1 597 Receptor kinase-like Gene Family AT2G28250 53.477 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Acco01g3763 PK_Tyr_Ser-Thr 1.4e-43 CL0016