Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3758 ATGAGCTGTCTAAGGCCAGAATCGCATGTAGCACAACAGATTCGGCGCGACAAGTTGAGAATCCAAAATAGTTCCCATCATTTACAAGATTTCCCAACTAATATTGAACAACTGTCACTACAACACCCAGGCTTAAACTCAGATTTTCTGCAAGTTAGGAGTGTCAGAAATTCAAACATGCTTTATGAACCTGCCTTTTATTCATCAGAAATTGCAAGTTTTTCAACACCTTCTAATACGTTGTCTCCTGAAGGCGACGAAGTCAAACCAAGTAGACTAATGTTGCCTCACTGTGCATCATTCCACCATTCATATGTATCGGAACCACCACCATCGTCGTCAGCCGGCGACCAACCCCGAGATAACTTGGGTCATGATTGGATGATTAATTATGGAAGTAGTTCCGTGGTTAATGAAACCAACTATCCCAACTCTAATGTTGCCACTGAGCTGAATGATAACAATTTGTATGTGCATCAGCACCTTGCGAAACCTAGTTACCACGAACTCATCGGAAGGCAGTTAGGCGAAATGCATAATCATTCTTCTTCTTCCCCACCCCCGTTCTTTCAGAATACTTTGCACGATGTTGTGAAGTATGCTTCTATCAGTTCCCAAGGATCTGATCACAGAGTCTCGCAGATGCAAAATCCTGGCCTTGGGATCTGGATGGGAAATCAAAATCAATCAAATCCTCAGGGATTATCTCTTTCACTCTCATCAAATTCCCATTCCAAGATTTCTCTTTCTGGGTTCCCATGTAATGATGGTCACGGATCACACGAACCCAACTCACGATGTGATAAATATGCAAAATCTGTTACTAAAGATAGTGGTAAATCACTCCAAGACGTCGTGGGAGTAGCTTCGAACACTAGTGGTTATAGAAGTAATGTGGGCCCGCTTGGGCCTTTCACTGGATATGCAACCATTTTAAAGAGTTCCAGATTCTTGAAGCCAGCTCAGGAGTTGTTTGATGAATTCTGTAATGTGTGTGGATCTAATGGTTCGGATTTCTCGAGGGTGTCTGGAGAAGCCAGTGTTACTAATTTTGCAGCTGAAGCTGTCATTGATAATGCAACTGGAAGTGCGGTTAGTGCAAAAATGAGTGTTAGTAATGATGCAGGTGCTGCTTCGTGTTCTATTTTGTATAATTCCAAGGAAAATAGTGGTGATTATGAATCAAGAGGAAACTTTGATTGTTTTTCCCGATCGGTGCATCGGCAAAAGAAGGCTAAGTTGCTGTACATGCAAGAGGAGGTTACGAGAAAACACAAGCAATATCACCAGCAAATGCAAATGGTTGTTTCCTCTTTTGAGTCAGTGGCAGGTCTTAGTTCGGCTACCCCTTTTGTCAGTATGGCTCTCAAGTCAGTAGCAAGACACTTTAGGATCCTGAAAAATGCTATCTTGGATCAGATCAAGCATTTGAAAGAGGTGTTGGGGGAGGATTTCCCAGGATCCACGTCTGGTGCAATTACTAAACTTGACACTGGTGGGCTAGCTTATCTGGACCAAAGCTTCCAGAAGAACAAAACTGCATTTCTCGAACCCCAACAAGTATGGAGGCCCCAGAGAGGCCTGCCAGAACGCGCAGTCGCAATTCTTAAAGCTTGGTTATTTGAGCATTTCCTTCATCCGTACCCCACGGATACCGATAAACATATGCTGGCTACACAAACTGGTCTATCTCGAAACCAGGTATCGAACTGGTTCATAAATGCTCGAGTCCGTGTGTGGAAGCCAATGGTTGAGGAAATACACAATCTTGAAACAAAAGGCGTGGTGGGTTGGAACCAGAACGAGGGAACAACATCTGGTGCAGAAGGAAGCGGTCAACAAGCTTTGGTTGAAGAAACTGCTCTGGGCAAGTTTGGTAGGCATGGGGATGTAATAATGCCGGAGAGGCAATTCCAGTGCATGGGAATGAGTTCTTCCTCAGGTGGAGGGAATTCGGAGGGAGTGGGATTTCAAATGGGTTCATCGGAGGACTGGAATCAAGATAAGAGGTCTAAATTGGAATGTCATCAGATAACGCCAGACATGGATGGGACTTTAATGGGTTTTGTACCCTACAGGCGTGGTGGAGGCCTCGATGTGGGGGGATTTGGGTCTGTGTCACTAACGTTGGGTCTTAGACATGGGGTTGAAGGCGCACAACACCACCAGCAACATCAATTGCACCAGGACGACCAGATTAGACGTCAATTTGGTGAGCATATGATCCATGACTTTGTGGGTTAA 2244 0.4452 MSCLRPESHVAQQIRRDKLRIQNSSHHLQDFPTNIEQLSLQHPGLNSDFLQVRSVRNSNMLYEPAFYSSEIASFSTPSNTLSPEGDEVKPSRLMLPHCASFHHSYVSEPPPSSSAGDQPRDNLGHDWMINYGSSSVVNETNYPNSNVATELNDNNLYVHQHLAKPSYHELIGRQLGEMHNHSSSSPPPFFQNTLHDVVKYASISSQGSDHRVSQMQNPGLGIWMGNQNQSNPQGLSLSLSSNSHSKISLSGFPCNDGHGSHEPNSRCDKYAKSVTKDSGKSLQDVVGVASNTSGYRSNVGPLGPFTGYATILKSSRFLKPAQELFDEFCNVCGSNGSDFSRVSGEASVTNFAAEAVIDNATGSAVSAKMSVSNDAGAASCSILYNSKENSGDYESRGNFDCFSRSVHRQKKAKLLYMQEEVTRKHKQYHQQMQMVVSSFESVAGLSSATPFVSMALKSVARHFRILKNAILDQIKHLKEVLGEDFPGSTSGAITKLDTGGLAYLDQSFQKNKTAFLEPQQVWRPQRGLPERAVAILKAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHNLETKGVVGWNQNEGTTSGAEGSGQQALVEETALGKFGRHGDVIMPERQFQCMGMSSSSGGGNSEGVGFQMGSSEDWNQDKRSKLECHQITPDMDGTLMGFVPYRRGGGLDVGGFGSVSLTLGLRHGVEGAQHHQQHQLHQDDQIRRQFGEHMIHDFVG 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3758 747 ProSiteProfiles 'Homeobox' domain profile. 519 582 IPR001356 GO:0003677
Acco01g3758 747 FunFam BEL1-like homeodomain protein 9 525 587 - -
Acco01g3758 747 SMART HOX_1 522 586 IPR001356 GO:0003677
Acco01g3758 747 SUPERFAMILY Homeodomain-like 524 589 IPR009057 -
Acco01g3758 747 SMART prehox3 306 472 IPR006563 -
Acco01g3758 747 CDD homeodomain 522 583 IPR001356 GO:0003677
Acco01g3758 747 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 210 604 - -
Acco01g3758 747 Pfam Homeobox KN domain 539 578 IPR008422 GO:0003677|GO:0006355
Acco01g3758 747 Gene3D - 525 587 - -
Acco01g3758 747 Pfam Associated with HOX 311 470 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3758 Acco-ChrAcco01 53623931 53629460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3758 312 591 Homeobox Transcription Factor Family AT4G34610 43.929 1.97e-65 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Acco01g3758 POX 7e-36 No_clan