Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3742 ATGATGGCCAAACTCAGAAGTAGCAGAGGTAAAAAGAAAGGAGGGATCGTGAAGCTGAAGGTTGTGGTAGAGAAGACCCAGAAGAAGCTGTTGCCGGGTATGAAATGGAGTTCACATAGAGAGGTGCGCGAAGAAGAAGAAGGGAGTGAGTCGAGCTATGTCCCAGAAGACGTGAAAGAAGGACATTTTGCGGTGATTGCAGAGGAGGAAGGAGAGGAGCCAAGGAGATTCGTGGTGCCACTAAGCTGTTTAACGCAGACAACATTTCTGAGGCTGTTGGAGGAAGCAGCAGAAGAGTATGGGTTTGATCAAGAAGGTGCACTAACTATTCCTTGCAGTCCGAGAGAGCTTGAGAGGATATTGGAGGGGCACTCTGAAAGAGATGATGCACTTAGCTGGAATAATGCCTGTAAACACATGGTTCAAACCTACTGA 435 0.4759 MMAKLRSSRGKKKGGIVKLKVVVEKTQKKLLPGMKWSSHREVREEEEGSESSYVPEDVKEGHFAVIAEEEGEEPRRFVVPLSCLTQTTFLRLLEEAAEEYGFDQEGALTIPCSPRELERILEGHSERDDALSWNNACKHMVQTY 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3742 144 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 40 120 IPR003676 GO:0009733
Acco01g3742 144 MobiDBLite consensus disorder prediction 35 54 - -
Acco01g3742 144 Pfam Auxin responsive protein 44 122 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3742 Acco-ChrAcco01 53509308 53509742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3742 45 112 Calmodulin-binding Proteins AT5G20810 51.471 3.93e-16 69.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3742 01 53509308 53509742 Acco01g3742 01 53509308 53509742 ECH