Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3709 ATGTCTCGCCGCGGCGGAAAGCAACCCCAGCACCAACCTTCTCCGGCGCCATTCCAACCAGCCCGGGGTCCAGATGTTGCTCCAGCCAGGCCACAAGGTGCCTCTCCCTCTGCTGCTCCGACTGATGAGTTGGGGCAGCTAACATTGCATTCTCCGGCGCCGTCATCGTCAAAGGCCACGAGTTTTCCCGACCGACCAGATTTTGGTAGAATGGGGAGAAAAGTTCAAGTCCGTGCAAATCACTTCCTGGTCGATGTGGCTGATAGGGATCTTCACCACTACGATGTATCCATTACTCCGGAAATCACATCAAAAAAAATCAACAGAGATGTGATGAGTCAACTAGTTCAGATGTACGGAGCGTCCCATATGAACAAGAGAATACCAGCTTTTGATGGCCGGAAGAGTCTTTTCACAGCAGGTCCTTTGCCCTTTACGTCAAAGGAATTTGTTGTCAAGTTGGTAGACAAAGATGAACATGGCAGCTCTTCTGGTTCAACGGGGAACAAACGTGAGCGCGAGTTTAAGGTTACCATTCGTTATGCTTCCAAGGCTGATCTCCATCATTTGCAAGAGTTTCTAAGAAGTCGACAGCTGGACAATCCTCAAGAAACAATTCAAGCACTTGATGTTGTCCTGAGGGCATCACCATCTGAAAAGTATACGGTTGTTGGAAGATCTTTTTTCTCACCAAGTTTGGGTCAAACTGGTGAGCTGGGAGATGGCATAGAATATTGGAGAGGATATTATCAAAGTCTTCGCCCCACTCAGATGGGACTTTCGCTTAATATTGATGTATCAGCAAGGGCATTTTATGAAAACATCTTTGTGACTGAGTTTATTGCAAAGCACTTTAATTTTAATTTTTCGAGGCGTCTGTCTGATCAAGACAGAATTAAGGTAAAGAGAGCTTTGAGAGGAGTAAAGGTAGAATTTGCTAATGCTCATGTTACTAGAAGTTACAAAATTACTGGAATCTCCAAGGAGCCACTGAGCGAGTTGACGTTCACTCTTGATGACAAGAAAACGAAAACAACTGTTGTTCAATATTTTCATGAGAAATACAATGTTGAGCTCAAGTATTTGTCTCTTCCTGCCCTCCAAGCCGGGAATGATGCAAAACCTATTTATTTGCCTATGGAGCTTTGCAAGATAGCTGCTGGGCAAAGGTACTCAAAGAAACTGAATGAGAGGCAAGTTACTGCTCTTTTGAGAGCAACCTGTCAACGACCTCTTGACAGGGAGAGGGACATCGGAGGGATGGCCAGACGTAACAATTTTAACAGAGACAAGCGTGTGCAAGAATTTGGAATTAATGTCAGTGAAAAACTGGCATTGTGTGATGCACGTGTTTTGCCTCCTCCAAGGCTTAAATATCATGAAACTGGGAAGGAAAAAATTGTTGAACCCTCGATGGGTCAGTGGAATATGATCAATAAGAAAATGTATAATGCTGGAAATGTGCAATATTGGACTTGTCTCAACTTTTCTACTCGAGTGAGCAGAGATTTGCCACTTCAATTCTGTAATGAATTGATAAGTATGTGCACCAGTAAGGGATTGGTTTTCAATCGAACCCCTTTACTTCCTGTAAGGTCAGCTCATCCTAATCAGATAGAGGGAGCTCTTAGAGAAGTTTACAGGCAAGCTGGTAAAGGGAAACTTCAGCTGTTGATTATAATCTTGCCCGACTTTAAAGGTTCTTATGCAAAGATTAAACGCATCTGTGAAACAGAATTGGGAATAGTGTCTCAATGCTCTCAGCCAAAGGAAGCTGTAAAGCTACAGAAGCAATATCTTGAAAATTTGGCCCTCAAGATCAATGTTAAGGTTGGGGGGCGCAATACAGTTTTGATGGATGCTGTCTCGAAGAGAATTCCTCATGTGACTGATGTCCCGACCATAATATTCGGTGCGGATGTAACACACCCTCAGCCAGGGGAGGACTCGAGCCCTTCTATAGCAGCTGTAGTAGCATCCATGGATTGGCCAGAGGTCTCCAAGTATCGTGGAATTGTTTCTGCCCAGTCACACAGAGAAGAGATCATACTAGACCTCCACAAAACTTATCAGGATCCTGTTAAGGGAGTTGTACATGGTGGAATGATCAGGGAGCTACTTGTGGCATTCTATAAATCAACCAAATGTAAGCCACACAGGATTATATTCTACAGGGATGGAGTTAGTGAAGGCCAATTCAGTCAGGTTTTACTCTATGAAATACAAGCCATAAGAAAGGCTTGTGCCTCGTTAGAGGAAGGATATCTGCCAACAGTAACCTTCTTGGTGGTACAAAAAAGACATCACACCCGATTCTTTCCTGACAGCCGTGATCAGACGGATAGAAGTGGAAATATTTTACCAGGCACTGTTGTTGATACTCGTATTTGCCATCCAAGAGAGTTTGATTTTTACCTCAACAGCCATGCTGGCATTAAGGGAACTAGCCGACCTACGCACTATCATGTTCTATTTGATGAGAATAAATTCAAAGCCGATGAGTTGCAGACTTTAACCAATAATCTGTGTTACACGTATGCAAGGTGCACTAAGTCAGTGTCAATAGTTCCTCCGGCATACTATGCCCATTTGGCTGCCTTCCGTGCTCGCTACTATATTGAAAGTGAGACATCAGATGTGGATTCTGGAAGTGGAAGTAGGAGCACTAATGTAGTTGTAACTCTTCCGGCAATCGTGGACAATGTCAAGGATGTCATGTTTTACTGCTAA 2730 0.4374 MSRRGGKQPQHQPSPAPFQPARGPDVAPARPQGASPSAAPTDELGQLTLHSPAPSSSKATSFPDRPDFGRMGRKVQVRANHFLVDVADRDLHHYDVSITPEITSKKINRDVMSQLVQMYGASHMNKRIPAFDGRKSLFTAGPLPFTSKEFVVKLVDKDEHGSSSGSTGNKREREFKVTIRYASKADLHHLQEFLRSRQLDNPQETIQALDVVLRASPSEKYTVVGRSFFSPSLGQTGELGDGIEYWRGYYQSLRPTQMGLSLNIDVSARAFYENIFVTEFIAKHFNFNFSRRLSDQDRIKVKRALRGVKVEFANAHVTRSYKITGISKEPLSELTFTLDDKKTKTTVVQYFHEKYNVELKYLSLPALQAGNDAKPIYLPMELCKIAAGQRYSKKLNERQVTALLRATCQRPLDRERDIGGMARRNNFNRDKRVQEFGINVSEKLALCDARVLPPPRLKYHETGKEKIVEPSMGQWNMINKKMYNAGNVQYWTCLNFSTRVSRDLPLQFCNELISMCTSKGLVFNRTPLLPVRSAHPNQIEGALREVYRQAGKGKLQLLIIILPDFKGSYAKIKRICETELGIVSQCSQPKEAVKLQKQYLENLALKINVKVGGRNTVLMDAVSKRIPHVTDVPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPEVSKYRGIVSAQSHREEIILDLHKTYQDPVKGVVHGGMIRELLVAFYKSTKCKPHRIIFYRDGVSEGQFSQVLLYEIQAIRKACASLEEGYLPTVTFLVVQKRHHTRFFPDSRDQTDRSGNILPGTVVDTRICHPREFDFYLNSHAGIKGTSRPTHYHVLFDENKFKADELQTLTNNLCYTYARCTKSVSIVPPAYYAHLAAFRARYYIESETSDVDSGSGSRSTNVVVTLPAIVDNVKDVMFYC 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3709 909 CDD PAZ_argonaute_like 277 386 - -
Acco01g3709 909 Pfam Argonaute linker 2 domain 413 459 IPR032472 -
Acco01g3709 909 SMART Piwi_a_2 557 874 IPR003165 GO:0003676
Acco01g3709 909 Gene3D - 626 909 IPR036397 GO:0003676
Acco01g3709 909 CDD Piwi_ago-like 433 873 IPR045246 -
Acco01g3709 909 FunFam protein argonaute 10-like 625 909 - -
Acco01g3709 909 Pfam Argonaute linker 1 domain 224 273 IPR014811 -
Acco01g3709 909 Pfam Piwi domain 559 873 IPR003165 GO:0003676
Acco01g3709 909 Gene3D - 451 619 - -
Acco01g3709 909 SMART PAZ_2_a_3 279 407 IPR003100 GO:0005515
Acco01g3709 909 Pfam N-terminal domain of argonaute 73 213 IPR032474 -
Acco01g3709 909 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 54 875 - -
Acco01g3709 909 SUPERFAMILY Ribonuclease H-like 543 874 IPR012337 -
Acco01g3709 909 ProSiteProfiles Piwi domain profile. 557 874 IPR003165 GO:0003676
Acco01g3709 909 MobiDBLite consensus disorder prediction 1 70 - -
Acco01g3709 909 SMART DUF1785_2 222 274 IPR014811 -
Acco01g3709 909 Gene3D paz domain 269 391 - -
Acco01g3709 909 MobiDBLite consensus disorder prediction 39 62 - -
Acco01g3709 909 Pfam Mid domain of argonaute 470 548 IPR032473 -
Acco01g3709 909 SUPERFAMILY PAZ domain 75 428 IPR036085 GO:0005515
Acco01g3709 909 ProSiteProfiles PAZ domain profile. 275 387 IPR003100 GO:0005515
Acco01g3709 909 FunFam Argonaute 10 451 619 - -
Acco01g3709 909 Pfam PAZ domain 298 403 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3709 Acco-ChrAcco01 53281592 53286774 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3709 52 909 Eukaryotic Initiation Factors Gene Family AT1G48410 60.428 0.0 1096