Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3707 ATGGCGGAGGACCGCAACGGCGATAAGAATGAAAACAGTGACTACAGTTCAGAGGATGAAGGAACTGAGGATTACAGGCGAGGAGGTTACCATGCCGTTCGAATTGGTGATACTTTCAATAATGGGTGCTATGTGGTACAGGCCAAGCTTGGTTGGGGTCATTTTTCTACTGTCTGGCTTGCTTGGGACGTCCAGAGATCGCGTTATGTGGCCTTAAAAATTCAAAAGAGTGCTCAGCACTATACTGAAGCTGCCATGGATGAAATAAAGATTCTTAAACAGATTGCAGAAGGGGACCCAGATGACAAGAAATTTGTTGTAAAGCTATTGGATCATTTTAAGCATTCTGGTCCTAATGGTCAGCATGTATGTATGGTGTTTGAATTTCTGGGTGACAATCTTCTGACACTTATCAAGTATAGTGATTACAGAGGGGTACCTCTGCCTATCGTCAAAGAAATTTGCTACCATATTTTGGCGGGCTTGGATTACCTTCATCGAGAGCTTTCCATAATACATACAGATTTGAAGCCAGAGAATGTCTTGCTTCTGTCTATGATAGATCCGTCAAAGGATCACAGAAAGTCAGGCGCCCCACTCATCCTCCCTAGCTCCAAGGGCAATTTTGTATCCAAGAATGAGGTCACAAAAGATAATGCTAGTTCGAATGGAAATCTGATCAGAAACCCAAAAAAGAAAATGCATAGAACAGCTAAGGTTGAGAATGAAATTATTGAGGAGGCTGGGGTTTCTAAAGCTCATGATCAAGAAGATTCTAACGATGATCTAAAATCAAATGTTGAATCTGTTGAAGATAAACCCAGTAGTTCGGTGAGTAAAGATGAACCAACAAAGACTGTTGAAACTAAGGATGTTCCACAAGGAAGTCAGAATCAGAGGAAAAGTAGCCGTTCCATGAGAAAAAAGTTGCTTGCAGCTGTTGATCTAAAGTGCAAACTGGTTGATTTTGGAAATGCTTGTTGGACTTATAAACAATTCACAAATGATATTCAAACAAGGCAGTATAGGTGTCCTGAGGTTATTCTTGGATCTAAATACTCAACTCCAGCGGATTTATGGTCTTTTGCTTGCATTTGCTTTGAGCTGGCCACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGGGATGAGGATCATCTGGCATTGATGATGGAGCTTCTTGGAATGATGCCTCGTAAGATCGCACTAGGTGGCAGCTATTCCCGGGAATTTTTCAATAGATATGGTGATCTAAGGCACATTCGTCGGTTGCGGTTCTGGCCTCTTAATAAGGTGCTTATGGAGAAGTATAATTTCAGCGAGCAAGACGCAAAAGACACGACAAACTTCCTTGTTCCCATACTTGATTTTGTCCCCGAAAATAGGCCAACAGCTGCTCAGTGTCTTAGTCATGCCTGGTTCAGTGCCGGTCCTCGGATTCTTCAGCCCTCTACAACTAGTGTGCAACGTGAGGCCATTGAGGGGGGAATGTCTGAAGAAACAAAGCGGGACAAGGCTCAGCAGGAGGCTGTGGAAGTTGGTGTGGGCAATATAGCCATTGGTGGAACTCCAAAGTCACTCAAAAAGTCCCAATCTGTTAGGTGA 1617 0.4304 MAEDRNGDKNENSDYSSEDEGTEDYRRGGYHAVRIGDTFNNGCYVVQAKLGWGHFSTVWLAWDVQRSRYVALKIQKSAQHYTEAAMDEIKILKQIAEGDPDDKKFVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPLPIVKEICYHILAGLDYLHRELSIIHTDLKPENVLLLSMIDPSKDHRKSGAPLILPSSKGNFVSKNEVTKDNASSNGNLIRNPKKKMHRTAKVENEIIEEAGVSKAHDQEDSNDDLKSNVESVEDKPSSSVSKDEPTKTVETKDVPQGSQNQRKSSRSMRKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGSYSREFFNRYGDLRHIRRLRFWPLNKVLMEKYNFSEQDAKDTTNFLVPILDFVPENRPTAAQCLSHAWFSAGPRILQPSTTSVQREAIEGGMSEETKRDKAQQEAVEVGVGNIAIGGTPKSLKKSQSVR 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3707 538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Acco01g3707 538 MobiDBLite consensus disorder prediction 236 288 - -
Acco01g3707 538 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Acco01g3707 538 CDD STKc_SRPK 33 478 - -
Acco01g3707 538 SMART serkin_6 44 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3707 538 Gene3D Transferase(Phosphotransferase) domain 1 127 479 - -
Acco01g3707 538 Coils Coil 253 273 - -
Acco01g3707 538 SUPERFAMILY Protein kinase-like (PK-like) 39 487 IPR011009 -
Acco01g3707 538 MobiDBLite consensus disorder prediction 1 23 - -
Acco01g3707 538 ProSiteProfiles Protein kinase domain profile. 44 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3707 538 FunFam CMGC/SRPK protein kinase 30 129 - -
Acco01g3707 538 FunFam Serine/threonine-protein kinase SRPK-like protein 308 478 - -
Acco01g3707 538 Pfam Protein kinase domain 44 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3707 538 Pfam Protein kinase domain 315 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3707 538 MobiDBLite consensus disorder prediction 206 228 - -
Acco01g3707 538 MobiDBLite consensus disorder prediction 193 306 - -
Acco01g3707 538 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 10 502 - -
Acco01g3707 538 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3707 Acco-ChrAcco01 53255010 53257445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3707 1 529 EF-hand Containing Proteins AT5G22840 65.038 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Acco01g3707 Pkinase 2.6e-19 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3707 01 53255010 53257445 Acco08g0371 08 2899716 2903179 CCT
Acco01g3707 01 53255010 53257445 Acco01g3707 01 53255010 53257445 ECH