Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3694 ATGCTTTTGCGTAGTGTCATTCTGCGCGAGCTATTTTTACTTCCTTCTTGGATTCGACCATGTAGAATTGCAGTTCCCATTTCGCAACGTGTTGAGGTTAAGGCTGGGGAGCCTGTTAAAGTTGATCCTCAAGATTTTGATTCCTACATTCATATTTCTCAGGCTGCCCTAGGTGAGACAAAGAAAGATAAGGGAGCTGAACCTGTGGTTCTTTACTTGAAATTTGGTGACCAAAATACTATAACTTGTTTTTCCTTGACTTATGACTTGTTTGTGGTTGTACGGGTGGTGATGATTTTGATGACATATCTGGTGAGTGGTGTCACTGTTGAATTCTATTTAGTTATTAATAGTGAAGAGGATGTAGATCTCCCAGTGATAGCAAAAGATAATGGAAAACCTGATACCAAGACTGGCCTTGCTAAGGTCGCCCCATCCAAAAAAAGTAATGCCACTGTTAATGATTCCAAAAAGCAAGCCAAGTTTGAACTGAAGGATGAAGAAGATGATGACGACTCTGATGAAGAAGATGATGAAGACTTTGATGAGGATGTGATGGATGCTGATAGTGATAGTGATGAGGAGAGTGATGAGGATGAAGATGATGAGGAGACTCCCAAGAAGCAGACTCCCAACAAGGCGGATCTGAGCAAAAAGAGACCCAATGACTCTGCATCAAAAACTCCAGTTTCTGCCAAGAAAGCTAAATCCAGTACTCCTGAAAAGAATGATGCTAAGACAGGTGGTCATACCGCAACTCCTCACCCAATGAAGAAGGGGGCAAAGACTCCTAACAGTGAAGCCAAGGAGTCCAAGTCTGGTGGACAATTGTCCTGCAAATCTTGCAGCAAGACATTCAACTCTGAAAGTGGTTTTCAACAACATAACAAGGCAAAGCATGGTGGTCAGTGA 912 0.4232 MLLRSVILRELFLLPSWIRPCRIAVPISQRVEVKAGEPVKVDPQDFDSYIHISQAALGETKKDKGAEPVVLYLKFGDQNTITCFSLTYDLFVVVRVVMILMTYLVSGVTVEFYLVINSEEDVDLPVIAKDNGKPDTKTGLAKVAPSKKSNATVNDSKKQAKFELKDEEDDDDSDEEDDEDFDEDVMDADSDSDEESDEDEDDEETPKKQTPNKADLSKKRPNDSASKTPVSAKKAKSSTPEKNDAKTGGHTATPHPMKKGAKTPNSEAKESKSGGQLSCKSCSKTFNSESGFQQHNKAKHGGQ 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3694 303 MobiDBLite consensus disorder prediction 205 222 - -
Acco01g3694 303 MobiDBLite consensus disorder prediction 143 157 - -
Acco01g3694 303 ProSitePatterns Zinc finger C2H2 type domain signature. 279 300 IPR013087 -
Acco01g3694 303 MobiDBLite consensus disorder prediction 166 204 - -
Acco01g3694 303 ProSiteProfiles Zinc finger C2H2 type domain profile. 277 303 IPR013087 -
Acco01g3694 303 MobiDBLite consensus disorder prediction 267 297 - -
Acco01g3694 303 MobiDBLite consensus disorder prediction 127 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3694 Acco-ChrAcco01 53154923 53160093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3694 31 300 C2H2 Transcription Factor Family AT5G03740 30.508 1.22e-20 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco01g3694 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3694 01 53154923 53160093 Acco08g0386 08 3010803 3011862 CCT
Acco01g3694 01 53154923 53160093 Acco01g3694 01 53154923 53160093 ECH