Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3685 ATGGATAACTCCGAGGCGCTCCGAAATTCCAATCATCCCGATAGAGCAAAAGCAAAGAAGCAGAAGGTGGTGGTGATAATGGGTCCTACTGGCTCTGGGAAGTCCAAGCTCGCCATTGATCTGGCTTCCCACTTCCCGGTCGAAGCTATCAACGCTGATTCCATGCAGGTTTACCGAGGCCTCGATGTTCTCACCAATAAAGTTCCACTCTCCGACCAAAAGGGGGTGCCTCACCATCTTCTGGGTACCGTAAGTCCAAACGTGGAATTCACAGCTAAAGAATTTCGAGATTCTGCTATCCCTCTCATCAATGACATATCTGCTCGCAACTGCTTGCCGGTCATAGTTGGGGGTACGAATTATTTCATCCAGGCTCTCGTGAGTCCATTCCTTCTAGATGAATCATTTGAAGATATGGACGAAACGTGTATGGACAACCTGTCTGGTACTACACCGTTGGATAAGAGTTTCATCCCTGAAAAGAACAGTTCAAACAATAATTATGATTTGCTTAGAGATATTGATCCAGTTGCCGCAAATAGAATGCATCCAAACAACCAAAGAAAGATTTGTCAATACCTTAGTTTGTATGCTCGCACTGGTGTTCTTCCAAGCAAAATTTTCCAAGGAAAAGCAGCGGAGTCGGAATATTGGATTTTCAAGTCCTCGTCATTGTCGCATCATGGTTTTTATCTGGATGACCATCCAAAAACAAAAGCAGTCTGTCATGTTCCCCTTCTATCGTATGTATTTGGGCAGAAGTGGGGTCAAGTTGGTAACTCCAGATATGATTGCTGTTTTGTATGTGTGGATGCATCTCTCCCTGTACTGGACAGATATGTAGAACAGAGGGTAGATTGCATGATGGATGCTGGATTACTTAATGAAGTCTATGACATTTACGATCCAAATGCTAATTATAGTCGAGGCTTGAGGCAGGCCATTGGTGTCCGTGAATTTGAACATCTTCTGAAAACCCCTGCAATTGAAGAAATCCAAAAAAGACAGAGAGAATTGACGGAGGATCCCAGGCGTGAAAAGGGTGATAAATTGTCTAATTACGATCTGAGGGAGCTCTTGAAGTTGTCTTCTGACATGAAATCCATTACACTTATGGAAGAAGTAATTGAAAAAGTAAAGGTTAACACACGGAGACTAGTCCGCCGTCAGAAAAGGATGGTTAATCGACTGCAAAAATTGTTTGATTGGACCATACACTACGTGGATTCCACGGATTCATTATCAAGTAAATCAGATGATATATGGACTGGCCAAGTGGTGGATCCTGCGGTGAAGATCGTTAGATCTTTCCTTGGTAATAACGAGAGCTTGTCATCCACGTCTGTGACATCAAATAGCAGTGGGATGAAGATACTTCAAAGGGACCTCTGGACCCAATACACATGCAAGGCCTGTGGAGATAGGGTGCTTAGAGGAATGCATGAATGGGAACAACACAAACAGGGTCGTGGACACCGGAAACGTGTTTCTAGTCTCAAGAACAAATCACAAGCTCTCTGTTTGGTGGAACAATAG 1536 0.4368 MDNSEALRNSNHPDRAKAKKQKVVVIMGPTGSGKSKLAIDLASHFPVEAINADSMQVYRGLDVLTNKVPLSDQKGVPHHLLGTVSPNVEFTAKEFRDSAIPLINDISARNCLPVIVGGTNYFIQALVSPFLLDESFEDMDETCMDNLSGTTPLDKSFIPEKNSSNNNYDLLRDIDPVAANRMHPNNQRKICQYLSLYARTGVLPSKIFQGKAAESEYWIFKSSSLSHHGFYLDDHPKTKAVCHVPLLSYVFGQKWGQVGNSRYDCCFVCVDASLPVLDRYVEQRVDCMMDAGLLNEVYDIYDPNANYSRGLRQAIGVREFEHLLKTPAIEEIQKRQRELTEDPRREKGDKLSNYDLRELLKLSSDMKSITLMEEVIEKVKVNTRRLVRRQKRMVNRLQKLFDWTIHYVDSTDSLSSKSDDIWTGQVVDPAVKIVRSFLGNNESLSSTSVTSNSSGMKILQRDLWTQYTCKACGDRVLRGMHEWEQHKQGRGHRKRVSSLKNKSQALCLVEQ 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3685 511 Hamap tRNA dimethylallyltransferase [miaA]. 23 415 IPR018022 GO:0008033
Acco01g3685 511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 130 IPR027417 -
Acco01g3685 511 MobiDBLite consensus disorder prediction 1 20 - -
Acco01g3685 511 Gene3D - 155 211 - -
Acco01g3685 511 Gene3D Classic Zinc Finger 463 506 - -
Acco01g3685 511 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 20 438 IPR039657 -
Acco01g3685 511 Gene3D - 20 462 IPR027417 -
Acco01g3685 511 FunFam tRNA dimethylallyltransferase 462 505 - -
Acco01g3685 511 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 23 217 IPR018022 GO:0008033
Acco01g3685 511 Pfam IPP transferase 56 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3685 Acco-ChrAcco01 53092520 53095958 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3685 26 501 C2H2 Transcription Factor Family AT2G27760 52.708 1.77e-168 483