Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3663 ATGTTTGGGTCAATGAGCATGGACGAATTCCTGGCCAACATTTGGAGTTCCGAGGTCGATTCGCAACCGCCCGCCGGTGAAGAATTTCCTGTTCAAAACAGAAATGCGGGTGCAGAAACAGAACTTGTTATCTCCCAACAGGACTCATTGTCTGTTCCTCCTCCGATTTGTAAGAAAACTGTGGATGAGGTTTGGTCTGAGATCCGCAAAGGTCATCACCGGCCACATGAGCAAAATGAAGAAACTAATAATAATGAGGAAATTAGCGGCAGTGAGAGCCTACAAAGGCAACAAACACTTGGGGAAATGACTCTGGAGGATTTCCTGATAAAAGCTGGGGTAGTACAACCATCATCATCGTTGCCATTTCAGATCCAGACTGGGAATATGACCGATAACAAACCATTCGATGCGATGGGAATGAGATTTTCTGCCCAACAAAATGTGGGAGGCCGTGTGTTGTCGCAGAGTCATAGCTTAGCAGGAAAAGAGCCCGCTACTAGTAGTGCCGCTGAGAAATGTCAGGGGTCAGGAGAGTCAACTAGGAATAGTAGCAGCAAGAAGAGGATAATTGATGGCCCTCCTGAAGTGGTCGTGGAGAGAAGGCAGCGCAGGATGTTGAAGAATCGAGAATCAGCAGCACGTTCTCGAGCTAGAAAACAGGCATATACGGTGGAGTTAGAAGCAGGTCTGAGCCAGCTTAGACAAGAAAATGAAAAGCTGAAGGAAATTCTGGCTGAAGCTGAGCGGAAGAGAAAACAAGAGATAGCACGGAAGAAGCATGCAACTAAGGGTCAGAAAAGAGCAGACAAGTTTAGGGCTATGAGGAGGACAATGAGCGCGTTCTGGAATAGAGCAAAAATGTTACAGGAATCCACAGTCAAATTGGAGCCATTAAGCTCAAAGAAGCGAAAAAGGACTAATTTATCATGTGATAGAGGAGACCGAGTGAAAAGGGCGGTCCGGTGCACAACCAAAACCACTAGTTCTGTGACAGATGTTCAGCAAAAAAGCAGGTCTGCAACAGCCAAAAGGTCCAAGAGTGAGAAAAAAAAGGTTGAAAGCTCTCTTCAAATTCAAGAGAAGACCTGCAAATTACTTGCTGGAGATGAAGGATTGGATAGAAGGAAAAAGAAGAAAATGTCCCCTAGTTCTGTACGTAAAAGGCACCACCAACAGGTTCAGTTACTTCACTGGTCTTTGATTTTAGTTTCTGCTGCCTCACATAACGTTGAAGCTCAGGTCTCATCGGAAGGCTGTCCAGCTTTTGGTTTTAATCATAAAAATTCTTCTGTTGTTAACAGTGGATATCAACTGGAAACTAAGATAGACAAAAGTACCAAAAAATATAAAAGGCCAGCACATAATACTTTGCGACTTGGGTCATCTGAAAGTGAAGAATTTGGAGCTGTGGAAAACAAATTAAATGAGAAAGGAATGAATAACTATGAGTTTTCTTTGTCTGCCAAAAATGATGGTCATTCCAACTTACATATAAGGAAGAATAGAATACGTAAAGATAAATTTGGAGATTGTGTGCCAAGAAGAGGAAGAACAAAGCTGGGTCTTCCTTCAGGGAGGGTGAAGTCAGAGAATCTCCCAATTCTGAAGCCAGCAGAGAACATGAGACCTGCTGATAAGAGTAAAATGGAATATGGTTGCCCTTCTTCAAAGAAACAAAAGGATTGCATGGTTTCAATTCATGTAGGGCAGATACATAACAATGTTCCTTATTCTTCAGGTAGTATTCTCCATGAATCCGGCACCTCCGTAGATCCTGCATGTTCTGGTCCATGCATGTTCTGGTCCATTCTGGGGAAAAGTGGAATGACTCTTGCTGAGGAACTTGATAAAACATTATCTCAGATGATCAGTTTTGATCACATTATGGATGATATTATGAACAACGAAGCTACTCATTGTTCAGAGGAAAGACATAGAAGCTGCTATGGCGGAAAAGGAGCTAAGACTATTGCTTTAACTGGAAAATGTAATGGGGAAAGGCCGGATAATGCCACCCCTTTATACAAATTACTTTGTTCTGCTATAATTTCAGAAGATGAAAGTGAAGAGTTATCCCCCCTCAATGAAGCATTGACTATATGTCAAAAGTGTGCGAGTGATGATTCTCCTTGTGATTCTTGTAATCAACTTGATTTTGAATCTAGATATCTTCATAAAACGGATTTTGAAGTTGATTCAGAGATAATTCTCCAAGTTCAAAATTGGCCGTTGGACAAAGCTTTCTTGCAAGAAGAGTATTGA 2265 0.4199 MFGSMSMDEFLANIWSSEVDSQPPAGEEFPVQNRNAGAETELVISQQDSLSVPPPICKKTVDEVWSEIRKGHHRPHEQNEETNNNEEISGSESLQRQQTLGEMTLEDFLIKAGVVQPSSSLPFQIQTGNMTDNKPFDAMGMRFSAQQNVGGRVLSQSHSLAGKEPATSSAAEKCQGSGESTRNSSSKKRIIDGPPEVVVERRQRRMLKNRESAARSRARKQAYTVELEAGLSQLRQENEKLKEILAEAERKRKQEIARKKHATKGQKRADKFRAMRRTMSAFWNRAKMLQESTVKLEPLSSKKRKRTNLSCDRGDRVKRAVRCTTKTTSSVTDVQQKSRSATAKRSKSEKKKVESSLQIQEKTCKLLAGDEGLDRRKKKKMSPSSVRKRHHQQVQLLHWSLILVSAASHNVEAQVSSEGCPAFGFNHKNSSVVNSGYQLETKIDKSTKKYKRPAHNTLRLGSSESEEFGAVENKLNEKGMNNYEFSLSAKNDGHSNLHIRKNRIRKDKFGDCVPRRGRTKLGLPSGRVKSENLPILKPAENMRPADKSKMEYGCPSSKKQKDCMVSIHVGQIHNNVPYSSGSILHESGTSVDPACSGPCMFWSILGKSGMTLAEELDKTLSQMISFDHIMDDIMNNEATHCSEERHRSCYGGKGAKTIALTGKCNGERPDNATPLYKLLCSAIISEDESEELSPLNEALTICQKCASDDSPCDSCNQLDFESRYLHKTDFEVDSEIILQVQNWPLDKAFLQEEY 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3663 754 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 204 219 IPR004827 GO:0003700|GO:0006355
Acco01g3663 754 SUPERFAMILY Leucine zipper domain 201 249 IPR046347 GO:0003700|GO:0006355
Acco01g3663 754 MobiDBLite consensus disorder prediction 69 83 - -
Acco01g3663 754 MobiDBLite consensus disorder prediction 326 356 - -
Acco01g3663 754 MobiDBLite consensus disorder prediction 369 391 - -
Acco01g3663 754 MobiDBLite consensus disorder prediction 69 97 - -
Acco01g3663 754 Gene3D - 199 255 - -
Acco01g3663 754 MobiDBLite consensus disorder prediction 340 356 - -
Acco01g3663 754 Pfam bZIP transcription factor 201 252 IPR004827 GO:0003700|GO:0006355
Acco01g3663 754 CDD bZIP_plant_BZIP46 201 247 - -
Acco01g3663 754 MobiDBLite consensus disorder prediction 155 188 - -
Acco01g3663 754 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 199 251 IPR004827 GO:0003700|GO:0006355
Acco01g3663 754 MobiDBLite consensus disorder prediction 155 195 - -
Acco01g3663 754 SMART brlzneu 197 261 IPR004827 GO:0003700|GO:0006355
Acco01g3663 754 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 283 IPR043452 GO:0003700|GO:0045893
Acco01g3663 754 Coils Coil 224 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3663 Acco-ChrAcco01 52885822 52894706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3663 2 283 bZIP Transcription Factor Family AT3G44460 45.734 1.96e-57 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco01g3663 bZIP_1 2.5e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3663 01 52885822 52894706 Acco01g3663 01 52885822 52894706 ECH