Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3661 ATGGCGACCCACAGAATGGGAGAAACTGGTTTATCTGAGTCAGCACCTTCAACTTCAAGTCACCTGCATGCTCCATATGGGGTTCTTCATGGGATTAGTTCTCCTTCATCCAGCTTAATCAATCAAGGATCCGGTTATTATTTTGGAGGATTGGAAGAGGCAATTCTGCAAGGAGTCAAGATTAGGAGTGAAGAAGCCAAAGCATCTTTATTCTCAGGCAAGCCTGCAACTACACTAGCAATGTTCCCTTCATGGCCCATGAGATTCCAGCACACCCTAAGAGAAGATGGTTCGAAATCCGGAGGAGAAAGCACTGATTCAGAATCCGGATTGAATACTATTTCAAGCAAAACAGAAGCACAGTTTGAACCAGAATCAGAATCTCCCATGAGTAAAAAGGCATCCAGTACAGATTATCAGGCTCTTGATCAGCAGCAGAAACAGCAGCTACAGCAACTAGAACAGGATATGGCTAGCGATGCCTCAAGATGCCAAACACTACAGAATCAGAATCAATCACCTAATAATCCATTTCAGGCAAAGAGGAAGGGAGACAGTTCTAAATCAGAGAAGCAACTTGATCCAAAGACCTTGAGGCGTCTAGCTCAAAACAGAGAGGCTGCAAGGAAAAGCCGTCTCAGAAAAAAGGCGTACGTGCAGCAGCTAGAGTCAAGTAGAATAAAGCTTTCCCAGCTCGAACAAGAGCTTCAAAGAGCACGCTCTCATCAGGGACTATTGGTGGGCGGCGGCGGCGGGACTGCTAGTGCCAATATAAGTTCCGGTGCAGCAATATTCGACATGGAATATGGGAGATGGTTGGAAGAAGACCAGCGGCACATGGAGGAGCTGCGGCGGAGCTTGGACGCAGCGTTGCCGGACAATGAACTGAGAGTGATGGTGGAGAATTATCTGAGACACTACGACGAGATATTTGAGCTGAAGGGAGTGGCAGCAAAATCGGACGTGTTTCACGTTATGAACGGCATGTGGACCACCCCCGCCGAGCGATGCTTCCTCTGGATTTCTGGCTTCCGACCCTCCGATCTCATTGGGATGTTGATACAGCAGCTAGAGCCAGTGGCGGAGCGGCAAATATTAGGGATGTGTGAGCTGAGGCAGTCGACACAGCAGGCGGAGGAGGCTCTGAGTCAAGGACTCGACCAGCTTCAGCACTCTCTTCTTCACACCGTCGTCGGAGGCCTCGCCGTCGACGGTGTTCAACAGATGTTTCTGGCCATGACCAAGCTTTCCAATCTTGAAGCCTTTATCCGCCAGGCTGATAATTTGAGACAGCAAACACTTCACCATTTGTGTCGATTACTAACGGTTCGTCAAGCAGCAAGATGTTTTCTTGTGATCGGAGAGTACTATGGTCGTCTTCGAGCTCTTAGTTCTCTTTGGGCTTCACGGCCACGAGAGTCATTGATCAACGATGAGACATGCCACCAAATAACAACGAACATGCCAATAGTTCATCAGTCGTCCCAGAATCATTTCTCAAATTTCTGA 1509 0.4831 MATHRMGETGLSESAPSTSSHLHAPYGVLHGISSPSSSLINQGSGYYFGGLEEAILQGVKIRSEEAKASLFSGKPATTLAMFPSWPMRFQHTLREDGSKSGGESTDSESGLNTISSKTEAQFEPESESPMSKKASSTDYQALDQQQKQQLQQLEQDMASDASRCQTLQNQNQSPNNPFQAKRKGDSSKSEKQLDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLSQLEQELQRARSHQGLLVGGGGGTASANISSGAAIFDMEYGRWLEEDQRHMEELRRSLDAALPDNELRVMVENYLRHYDEIFELKGVAAKSDVFHVMNGMWTTPAERCFLWISGFRPSDLIGMLIQQLEPVAERQILGMCELRQSTQQAEEALSQGLDQLQHSLLHTVVGGLAVDGVQQMFLAMTKLSNLEAFIRQADNLRQQTLHHLCRLLTVRQAARCFLVIGEYYGRLRALSSLWASRPRESLINDETCHQITTNMPIVHQSSQNHFSNF 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3661 502 MobiDBLite consensus disorder prediction 103 182 - -
Acco01g3661 502 Gene3D - 195 246 - -
Acco01g3661 502 FunFam BZIP family transcription factor 195 245 - -
Acco01g3661 502 SMART brlzneu 192 256 IPR004827 GO:0003700|GO:0006355
Acco01g3661 502 SUPERFAMILY Leucine zipper domain 196 239 IPR046347 GO:0003700|GO:0006355
Acco01g3661 502 MobiDBLite consensus disorder prediction 94 199 - -
Acco01g3661 502 Pfam bZIP transcription factor 196 236 IPR004827 GO:0003700|GO:0006355
Acco01g3661 502 Pfam Seed dormancy control 279 353 IPR025422 GO:0006351|GO:0043565
Acco01g3661 502 Coils Coil 215 242 - -
Acco01g3661 502 PANTHER TRANSCRIPTION FACTOR TGA9 137 473 - -
Acco01g3661 502 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 194 238 IPR004827 GO:0003700|GO:0006355
Acco01g3661 502 ProSiteProfiles DOG1 domain profile. 262 470 IPR025422 GO:0006351|GO:0043565
Acco01g3661 502 Coils Coil 150 170 - -
Acco01g3661 502 MobiDBLite consensus disorder prediction 183 199 - -
Acco01g3661 502 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 199 214 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3661 Acco-ChrAcco01 52874012 52879979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3661 173 502 bZIP Transcription Factor Family AT1G08320 68.485 5.41e-161 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco01g3661 DOG1 3.2e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3661 01 52874012 52879979 Acco08g0427 08 3378273 3384856 CCT
Acco01g3661 01 52874012 52879979 Acco01g3661 01 52874012 52879979 ECH