Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3659 ATGAAAAGCACCAGATCAATCCTCTTGCTCAAATTATTCCAATCCACATGCCAGAACACTACTCAGGAGCTCAGCTTTAAAGCCTTTAGCTTTACCAAAAGGCTCCCCACGGATTCCCCTGGCCGTGTTAAATATTCCTGCAAATCAGAATCAAGAACAAGAAAAGGAGGAAGTGATATGAAGATACTGTTCAAGGAATCTTTGTTCCATTTTTTTCATGGTGGGATGTATCATCATAATCAACAGAATCACGCAAAGAACATGCATTCTTCTTCTTCCAGAATGGCGATTCCTTCTGAGAGGCATTTGTTCCTTCAAAGTGGAAATGGGTCTGGCGATTCTGGACTTGTGCTTTCAACTGATGCTAAACCCAGGTTGAAATGGACACCTGATCTTCATGCCCGATTTATTGAAGCAGTCAATCAGCTGGGAGGAGCTGACAAAGCAACTCCAAAAACAGTAATGAAACTCATGGGGATTCCAGGGCTAACTTTATATCATCTTAAGAGCCATCTTCAGAAGTACAGACTGAGCAAGAATCTGCCTGGACAAAGTAGCAGTAGTGTGACACACAAAATCACGACAAATGCAAGTGCCGTTAGCGGAGAAAGAATTTCTGAAGCAAATGGAACTCATCATCACAATCATATGAACAATCTAACCCTTGGGACGCCGCAGGCTAATAATAACAAAGATTTACATATAAGCGAGGCGTTGCAGATGCAGATTGAGGTGCAGAGAAGGCTAAATGAACAACTTGAGGTTCAAAGACACTTGCAGCTGCGAATAGAGGCGCAAGGGAAATACCTACAGGCAGTGCTGGAGAAAGCACAGGAGACGCTTGGGAGACAGAATTTAGGAATAGTAGGTCTCGAAGCTGCCAAAGTTCAACTCTCAGAACTAGTTTCCAAAGTATCCTCTCAGTGTCTGAGTGCTGCTTTTTCAGAGCTGAAGGAATTAAACACATTCTGCCCACGAACGAACCAACCCAACGACTGCTCCATGGACAGTAGCCTCACTTCCTGCGATGCATCTCAAAGGGATCATCAGGATATGCCCCTTGCTGGTGGTATGTGCTTAGCCAGAGCTTTTAATGGCCACACCTTCATGGAACCCAACAAGGACGCCCCTGAGGCCAAAAAGAACAACAATAATTTTCTGAATCCTTTGGGGAAGAATATATCAGAAAGAAGCAGTACTGGCAACTTAACAATGAGCATTGGAGTTGAAGGAGAAACGAGAAACGGAAGCAACAGCGGCTTCTATCCTGAGAGAATAAGCACCAATAATAGAACAGAAGGGATGAAATTAGGAGTGGACGAAAAAGTTGGCGGAGATTATAGATTGCCGTACTTTGCGGCACCAAGATTAGACCTTAACATCCACCAAGAAAACGATGGTGCCGCCAGTTGTAAACAACTGGACCTCAATGGATTCAGCTGGAACTGA 1449 0.4403 MKSTRSILLLKLFQSTCQNTTQELSFKAFSFTKRLPTDSPGRVKYSCKSESRTRKGGSDMKILFKESLFHFFHGGMYHHNQQNHAKNMHSSSSRMAIPSERHLFLQSGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLPGQSSSSVTHKITTNASAVSGERISEANGTHHHNHMNNLTLGTPQANNNKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGIVGLEAAKVQLSELVSKVSSQCLSAAFSELKELNTFCPRTNQPNDCSMDSSLTSCDASQRDHQDMPLAGGMCLARAFNGHTFMEPNKDAPEAKKNNNNFLNPLGKNISERSSTGNLTMSIGVEGETRNGSNSGFYPERISTNNRTEGMKLGVDEKVGGDYRLPYFAAPRLDLNIHQENDGAASCKQLDLNGFSWN 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3659 482 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 78 364 IPR044848 GO:0003700
Acco01g3659 482 FunFam Myb family transcription factor 122 180 - -
Acco01g3659 482 SUPERFAMILY Homeodomain-like 122 178 IPR009057 -
Acco01g3659 482 Coils Coil 236 256 - -
Acco01g3659 482 Pfam Myb-like DNA-binding domain 125 176 IPR001005 -
Acco01g3659 482 NCBIfam myb-like DNA-binding domain, SHAQKYF class 123 178 IPR006447 GO:0003677
Acco01g3659 482 MobiDBLite consensus disorder prediction 408 427 - -
Acco01g3659 482 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 120 180 IPR017930 -
Acco01g3659 482 Gene3D - 122 180 - -
Acco01g3659 482 Pfam MYB-CC type transfactor, LHEQLE motif 234 280 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3659 Acco-ChrAcco01 52852373 52856698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3659 155 482 G2-like Transcription Factor Family AT3G04030 46.398 5.81e-75 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco01g3659 Myb_DNA-binding 4.5e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3659 01 52852373 52856698 Acco08g0431 08 3433506 3435864 CCT