Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3655 ATGGGTGAGACAGAGAAGGTGGTGCCGGAGGCGGAGGTGCTACCCAAGGCTATAGTGCGCCGAGTGGTGAAAGACGAGCTTTCACGGTGCTCCCACGACGGAGACATTTCCATTCACAAAGATGCCCTCCTCGCCTTCTCGGAAAGCGCGCGGATCTTCATCCACTACCTTTCCGCAACGGCCAACGACATATGCAAGGAATCAAAGAGGCAGATAATAAGCGCCGATGATGTATTTAAAGCTCTTGAAGAGACTGAGTACTCCGAGTTTGTCCGGCCCCTAAAAGCTTCTCTTGAAGAGTTTAGGAAGAAGAATGCTGGAAAGAAAGCGGGTGCATCAAAGGAAAAGGATGGAAAAAAGAAAAGAAAGTTAGAGGATGAGGCATCTGATAAAGACGAGGAGGTTGGTGACGGCGACAAATGA 423 0.4965 MGETEKVVPEAEVLPKAIVRRVVKDELSRCSHDGDISIHKDALLAFSESARIFIHYLSATANDICKESKRQIISADDVFKALEETEYSEFVRPLKASLEEFRKKNAGKKAGASKEKDGKKKRKLEDEASDKDEEVGDGDK 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3655 140 FunFam DNA polymerase epsilon subunit 3 6 140 - -
Acco01g3655 140 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 12 136 - -
Acco01g3655 140 Gene3D Histone, subunit A 6 140 IPR009072 GO:0046982
Acco01g3655 140 MobiDBLite consensus disorder prediction 105 140 - -
Acco01g3655 140 MobiDBLite consensus disorder prediction 105 129 - -
Acco01g3655 140 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 82 IPR003958 -
Acco01g3655 140 SUPERFAMILY Histone-fold 13 129 IPR009072 GO:0046982
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3655 14 118 CCAAT-HAP3 Transcription Factor Family AT5G47640 31.429 1.58e-11 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Acco01g3655 CBFD_NFYB_HMF 2.2e-08 CL0012