Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3647 ATGCTGTGGAGCTGCCATATCAAAGATACATCAGAAAGGGGTGTGACTGGTGACAGATTGTATGACCCAATTTTTCTGTTAATATCCGATCCGCACACATCAATGGAACATCTTCCTCCTCCTGGTTTTCGCTTCTACCCAACGGAGGAAGAGCTGGTGGCTTTCTACCTCCACAACAAGCTTCAAGGTCTAAGTGATGACCACATCAACAGAGTCATCCCTGACATTGGCGTTTATGATTTTGAGCCCTCCGAGCTTCCCAAGATGGCGGGAGAGATGTGTCGCGGGGACACGGAGCAGTGGTTCTTCTTCTCGCCGAGACAAGAGAGAGAAACCAGAGGAGGAAGACCCAACCGATGCACGGCTTGTGGGTATTGGAAAGCCACGGGTTCTCCGGGCTACGTTTACTCTTCTGATAACAGAGTCATTGGGTTGAAGAAGACCATGGTTTATTACAGAGGCAAAGCTCCTTGCGGAAGAAAAACCAAGTGGAAGATAAACGAATACAGAGCTATTGAATTCTCTCACCAATCCTCCGTCGCCACTCCTAAGTTGAGGAACGAATTTCGCTTGTGCCGAGTTTACGTGATATCGGGAAGCTCTCGAGCATTTGATCGCCGCCCTTTAGCTTCTTCAACAACGGGGCACGATCAGAATACGAGGTTGCATGAATCGAGCTCATCACTTGGAACCTCACACACAAACCCAGATGGCGGGGGATCGAGTCGTGTAAACAACGAAGAAGAAGAAGAACCTCTCCGGGACTGGGAACGCTTTACTTGCGATGCTTCTGTTTATTATGACTCAAATCCTTGA 816 0.4865 MLWSCHIKDTSERGVTGDRLYDPIFLLISDPHTSMEHLPPPGFRFYPTEEELVAFYLHNKLQGLSDDHINRVIPDIGVYDFEPSELPKMAGEMCRGDTEQWFFFSPRQERETRGGRPNRCTACGYWKATGSPGYVYSSDNRVIGLKKTMVYYRGKAPCGRKTKWKINEYRAIEFSHQSSVATPKLRNEFRLCRVYVISGSSRAFDRRPLASSTTGHDQNTRLHESSSSLGTSHTNPDGGGSSRVNNEEEEEPLRDWERFTCDASVYYDSNP 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3647 271 SUPERFAMILY NAC domain 35 195 IPR036093 GO:0003677|GO:0006355
Acco01g3647 271 Gene3D NAC domain 48 199 IPR036093 GO:0003677|GO:0006355
Acco01g3647 271 ProSiteProfiles NAC domain profile. 39 197 IPR003441 GO:0003677|GO:0006355
Acco01g3647 271 MobiDBLite consensus disorder prediction 206 257 - -
Acco01g3647 271 MobiDBLite consensus disorder prediction 206 242 - -
Acco01g3647 271 MobiDBLite consensus disorder prediction 243 257 - -
Acco01g3647 271 Pfam No apical meristem (NAM) protein 40 170 IPR003441 GO:0003677|GO:0006355
Acco01g3647 271 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 38 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3647 Acco-ChrAcco01 52789005 52791209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3647 42 260 NAC Transcription Factor Family AT5G22380 57.269 1.46e-85 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco01g3647 NAM 6.3e-29 No_clan