Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3630 ATGGAGGGAACCGAGAAAATGGCCGGCGGGGTTTCAAGGGAGGCGCAGATGTCGATCGCCGCTTCCTCGATGTTTCCTGGATTCAGGTTCTGTCCTACCGACGAAGAATTGATTTCCTATTATCTCAGGAAGAAGCTGGACGGCCGCGAAGAGAGCGTTCAAGTTATTTCTGAGGTTGAGATTTGCAGATATGAGCCTTGGGATTTACCAGCCAAATCATCCATTCAATCAGATACCGAGTGGTTCTTCTTTTCTCCTCGTGGAAGAAAGTACCCAAATGGTTCACAAAGTAAGAGGGCAACCGAATGTGGCTATTGGAAGGCCACTGGAAAAGAGCGCAACGTAAAGTCAGGTTCTAATGTTGTAGGCACCAAGAGAACTTTGGTATTCCATATGGGTCGTGCCCCAAAAGGGGAAAGGACTGAATGGATTATGCACGAGTACTGCATCAACGACAAATCCCAGGATTCCTTAGTTGTTTGTCGGCTAAAGAGGAACACAGAGTTTCGTCATAACGATGCTTCAAACAGAGCATCTTCAAGTCAACAGCAGGCAGTGAATTCTCATGAAAGCAATTGTGCTGTGTCAGAAGCTGAGATAGATGAAAGGGGCGTGTCCGAGCAAGATAAAGGGGTTGGATGCAGTTCAAAACGCAGCAGTTGCAGTTACGGTTCTCCTTCAGTTGAGCAAATTGATTCTGCCTCTGAATCCAATCAAAGAACAGTCAACTATGACGCTGCTGTGGCAGAATCTTCGAGTCACCAAAAGGAGGTGGATGAAGAAGATTGTTATGCTGAGATACTGAAGAATGATATCATCAAATTAGATGAATCTTCACTGACGTCGCAAGAGGCTCATGCAATATCGCTGGATCCTCCTCAGGCACTTCCATTCCAAGGCACAGCCCAACGAAGAATTAGATTAAAGGTGGATAAACCAAAGCACCGTGCTGCTGCAGGATTTGGCTTTCCCAACTCAAAGCGCCCTTCCAAGACTAACACCCTCTTTGGTACAGTGACAAACGGAATGCTGTTATGTGTTTTCTTCGTTTTAACTTTGGCAGCCTTATATCTGTCCTTAATGGGTTTGAGAAGTCTCAAACCTGTGAAAAGCTGTGAGAGATTTGGTTCCGCATGTAAATTATGA 1146 0.4555 MEGTEKMAGGVSREAQMSIAASSMFPGFRFCPTDEELISYYLRKKLDGREESVQVISEVEICRYEPWDLPAKSSIQSDTEWFFFSPRGRKYPNGSQSKRATECGYWKATGKERNVKSGSNVVGTKRTLVFHMGRAPKGERTEWIMHEYCINDKSQDSLVVCRLKRNTEFRHNDASNRASSSQQQAVNSHESNCAVSEAEIDERGVSEQDKGVGCSSKRSSCSYGSPSVEQIDSASESNQRTVNYDAAVAESSSHQKEVDEEDCYAEILKNDIIKLDESSLTSQEAHAISLDPPQALPFQGTAQRRIRLKVDKPKHRAAAGFGFPNSKRPSKTNTLFGTVTNGMLLCVFFVLTLAALYLSLMGLRSLKPVKSCERFGSACKL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3630 381 MobiDBLite consensus disorder prediction 172 239 - -
Acco01g3630 381 ProSiteProfiles NAC domain profile. 24 166 IPR003441 GO:0003677|GO:0006355
Acco01g3630 381 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 23 236 - -
Acco01g3630 381 MobiDBLite consensus disorder prediction 212 239 - -
Acco01g3630 381 MobiDBLite consensus disorder prediction 173 194 - -
Acco01g3630 381 Pfam No apical meristem (NAM) protein 26 149 IPR003441 GO:0003677|GO:0006355
Acco01g3630 381 Gene3D NAC domain 33 171 IPR036093 GO:0003677|GO:0006355
Acco01g3630 381 FunFam NAC domain-containing protein 100-like 33 170 - -
Acco01g3630 381 SUPERFAMILY NAC domain 16 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3630 Acco-ChrAcco01 52682116 52683894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3630 11 285 NAC Transcription Factor Family AT2G27300 53.986 7.62e-97 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco01g3630 NAM 5.2e-35 No_clan