Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3625 ATGGCCTGCCGGATACTGATCGCCGGGAACTTGGATCCAGAGAGAAAGAGGTGTGGGGGCTTGAGGACTAAACAAGCGGGCAGAGGATCCTTTTTCGTCCTTTTGAATCCCGTCGTTGAAACGATGGGCTTTTTGTTGAAACAAGTTCTCAAGACTCTCTGCGCTCGGAATCAATGGTCTTACGCTGTCTTCTGGAAGATCGGCCTCCATAATCCCAAGCTGTTGATTTGGGAAGATTCCTATTATGAACCCTTGCCATGTCAATTTCCTAGGCGCGTCGCTGGAACAGAGACTTCTAACTTACTTTCTGTGAGTGGGGAAGGCTTCTGGCGTTCTTCTGATTCTCATTCTTCTCAGAGAGGATCCCAGGAGGAGGACAGAGTCTGCGCTTTGATTAACAAAATGATGGTGAATAATTCGGTCAATGTCATGGGTGAGGGGATTATCGGGCGGGCTGCATTTACAGGAAACCATCAGTGGATTCATTTGAACAATTTTAGAAGAGATGTATATCCGGGGGAGGTGTACAATGAGGTGCATCTCCAGTTTTCAGCTGGAATGCAGACAGTAGCCGTTATTCCTGTGCTTGCCTACGGGGTTGTTCAACTTGGTTCTTCCTTGCCAATAATTGAGAACATGGGATTAGTGAATGAAGTCAAGAGCTTTATTATGCAATTGGGGTGTGTCCCTGGTGCTCTTCCATCTGAAGATTTTTCAGCAAAAGCTTCTATTGAAAGATTTGGTAACCCTGTAGTTGGGGTGGCCGTGTCTGTTGATCCACCTGTAATTAACTCCAACCCCACACCCTCAGTAACTTATGGCCTCAACCAAGATATCAATTTGTCTTGTACTTCAAGGCCTATTGGTCAACTAATTCATCCTCTTAAACGAGAGATAAGTAACCAGCAGGGTTCTGTATTGACACATCAAACCCCTAATATTATTCAGATATTATCCAATTACCATGATGATCTTTGTGAACCTTCAGCAATACCAGTGATGAACCCAAGTTTTGATGTCCAGCCTGGGAATTTAGTCATGGAGGCAGAGGTGATGCCCTTGAATGCTAGATCTGCATCCAAAAATTTTACCAAGTTGAGCCAATCAGGTCTGGGTGACTGCGGCATAAAATTTAAGGGACAAGAACAGTTGTCTAGCAGTGGGAATCAAAGTTATCTTAATCCAAATTTGACTGCCTCAAATACATTGTCTGAAATGAAAAATAGTGGAGGCCATGTGCTTGTTCACAATCAGATTACTACTAGTTCTTCATCAATTCATGATGGAGCGAGCAGACTTTTAAGGCCAAATCTCATTGCCAGCTCTGTTTTTGGTCCTCCTAAAGTTGCCTCTGCTGATTTTTGTGAAACCAGGAAGGCTGGGCCTGGGCTTCAAAATGATAATTTAACAAACGTAGGATACTCTCTGCCTAACCTGAGCAGTCAATCTGATGCTAGTATCATGCCTCTAGAAGGTTCTGATCAGAACAATGTTACTGTGGATTTAAAGCATGCTCACGATAAAATGGCTTCCACGGGCCACAGGGTGGATGATGATCTGCTGCAGGCCATCAAGATCCCATCTCTTCATCTTTTGGAGCAGCAGGTGTCTATGGGTGATCACATACCTGCTTGTCTTCTACCTCCATCAAGTGATGACCTATTTGATGTCTTAGGCGTAGATCTTAAAAACAAACTACTGAATGAAAACAGAACTAAGTTGCTTGCCAAAGAATCAAATGCTGGTGCTGAAATTCTGCAAAACAAGGCAACATGTTTGAGCATGCAGAATATGGATCCTGATGTTTATTTAATTGACGAAGCCATTTCAGAAAGTGGTGTCTTCTCTGAGAGAGGTGATGACCACCTCCTGGATGCTGTGGTTTCAAGGGCAAAGTCTCTTGGGAGGCAGGATTCTGATGTTATGTCTTGCTGGACAACATTGACTAGGACTAGTAATGCTTCTGTTCCCTCTCCTGCTTATAGGAAGGTTTTGCCTGATCATACTCAGGGTGGAATCTCTGGTTTTCCTAAAGATGCGAGTAAAGCAGGCGCTGCAGAAACTAGTTCTCTTAGGTCTGGGTGTAGCAGAGATGATGCTCAAAACTGCTCTCAAACTACTTCCATTTATGGGTCTCAACTTAGCTCATGGATTGAGAATGCTACTAATATGAAGCGTGAAAATAGCGTCTCAACTGGATACTCTAAGCGGCCTGATGAAGTTTGTAAATCAAATCGTAAAAGGCTTAAGCCTGGGGAGAACCCCAGACCTCGACCTAAAGATCGCCAAATGATTCAAGATCGTGTGAAAGAACTGCGGGAAATTGTGCCAAATGGGGCAAAATGTAGCATAGATGCACTTCTTGAACGCACGATCAAGCACATGCTTTTCTTGCAAAGTGTGACAAAGCATGCTGACAAGCTAAAACAAACAGGGGAATCTAAGATTATGAGTAAGGAAGGTGGACTGCTTTTAAAAGACAATTTTGAGGGAGGGGCTACATGGGCATATGAGATTGGCTCACAATCAATGGTTTGCCCCATCATAGTTGAGGATCTGAATCCCCCTCGTCAGATGTTAGTTGAGATGCTTTGTGAAGATCGAGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAGGCTTGGGGTTGACCATCTTGAGGGGGGTGATGGAAACCCGAAACGGCAAGATCTGGGCATGCTTTGCTGTAGAGGCAAATCGGGATGTAACAAGGATGGAGATATTTATGTCTCTTGTTCATGTTTTGGAGCAAACGGGGAAGGGCAGTGCATCTCCATCCAAACCTATATATCACTCCTTCCCTCAAGCCACCCAGATATCAGCAGCTGGCGGACCTAGTAGTCTGCAATGA 2871 0.4424 MACRILIAGNLDPERKRCGGLRTKQAGRGSFFVLLNPVVETMGFLLKQVLKTLCARNQWSYAVFWKIGLHNPKLLIWEDSYYEPLPCQFPRRVAGTETSNLLSVSGEGFWRSSDSHSSQRGSQEEDRVCALINKMMVNNSVNVMGEGIIGRAAFTGNHQWIHLNNFRRDVYPGEVYNEVHLQFSAGMQTVAVIPVLAYGVVQLGSSLPIIENMGLVNEVKSFIMQLGCVPGALPSEDFSAKASIERFGNPVVGVAVSVDPPVINSNPTPSVTYGLNQDINLSCTSRPIGQLIHPLKREISNQQGSVLTHQTPNIIQILSNYHDDLCEPSAIPVMNPSFDVQPGNLVMEAEVMPLNARSASKNFTKLSQSGLGDCGIKFKGQEQLSSSGNQSYLNPNLTASNTLSEMKNSGGHVLVHNQITTSSSSIHDGASRLLRPNLIASSVFGPPKVASADFCETRKAGPGLQNDNLTNVGYSLPNLSSQSDASIMPLEGSDQNNVTVDLKHAHDKMASTGHRVDDDLLQAIKIPSLHLLEQQVSMGDHIPACLLPPSSDDLFDVLGVDLKNKLLNENRTKLLAKESNAGAEILQNKATCLSMQNMDPDVYLIDEAISESGVFSERGDDHLLDAVVSRAKSLGRQDSDVMSCWTTLTRTSNASVPSPAYRKVLPDHTQGGISGFPKDASKAGAAETSSLRSGCSRDDAQNCSQTTSIYGSQLSSWIENATNMKRENSVSTGYSKRPDEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIMSKEGGLLLKDNFEGGATWAYEIGSQSMVCPIIVEDLNPPRQMLVEMLCEDRGFFLEIADLIRGLGLTILRGVMETRNGKIWACFAVEANRDVTRMEIFMSLVHVLEQTGKGSASPSKPIYHSFPQATQISAAGGPSSLQ 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3625 956 MobiDBLite consensus disorder prediction 727 763 - -
Acco01g3625 956 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 46 222 IPR025610 -
Acco01g3625 956 CDD bHLH_AtLHW_like 753 822 - -
Acco01g3625 956 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 42 946 IPR043561 GO:0003700|GO:0006355
Acco01g3625 956 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 749 798 IPR011598 GO:0046983
Acco01g3625 956 MobiDBLite consensus disorder prediction 652 702 - -
Acco01g3625 956 MobiDBLite consensus disorder prediction 739 763 - -
Acco01g3625 956 MobiDBLite consensus disorder prediction 686 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3625 Acco-ChrAcco01 52656223 52661581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3625 551 953 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 53.140 1.04e-116 370
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3625 01 52656223 52661581 Acco08g0489 08 3854901 3857196 CCT
Acco01g3625 01 52656223 52661581 Acco01g3625 01 52656223 52661581 ECH