Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3612 ATGCCCATGGATCCCTTGATCCGCAAGCTGCGCCGCCGCCTTCTTGAATGGCTTCGCCGATCTCGCTCTGATCAAATATACTTTATGAGGCGACTTTCATACAAGGATGTTAGAAGAGCAACGGATGGTTTTCACAGAATTATCTATAGCAATCCTCAAGTTGCTGCATATGCTGCCAAATTTGAAGATGGTAGCGCTTCTTTGGTGAAAGAAATAAAGGATTTTGATCAAGCAGATGACAGTTTCTACAGCGAAGTGCAATTCTTGGGCCGCTTGCATCATCGACACCTTTTGTCACTCAAAGGATTTTCCTTGAATCAAAAGAGGTTGCTCATTTTTGACAGCATAGAGAATGGAAGCTTAAAGGATCATCTAAATGATCCCCTGAAGACACCCTTAAATTGGAGGACAAGGTTACAGATAGCTATTGATGTTGTGGCTGCCCTGGAATACTTGTTTCTCTTCGTTGAACAACCACTATGTCATGTCTCCATCAGCTCCAGCAATATCATGTTCGATGATAATTTTACAGCTAAACTATCTGATTATGGTCTTCTTACTTGTGTTGGAAATCCAGTTATGGTGACGAATTCAAAAGATGACAGCATGAGGCAGAAAAGTGGTAACATAATATACCAATTGGGAGTTTTCATACTGGAACTTGTCACTGGTCAGTCTTCAGAGATGGAAGGTTCAGATCTAATAGAATGGATCCAGGAATCACGCTTCTACAGTTCCATTCATAAGATGGTAGACCCTGATCTAGGCGACAATTACGATTCTAGGGAGTTAAAAACCCTTCTAGCTGTTGCAAAGTTATGTGTCAAATCAAGGGACAAGCCTGTATTTACAATCCCCCAGTTATTTCGATATCTTCAGCACAAGGTGGATATTCCTCGTGTCTAA 906 0.4139 MPMDPLIRKLRRRLLEWLRRSRSDQIYFMRRLSYKDVRRATDGFHRIIYSNPQVAAYAAKFEDGSASLVKEIKDFDQADDSFYSEVQFLGRLHHRHLLSLKGFSLNQKRLLIFDSIENGSLKDHLNDPLKTPLNWRTRLQIAIDVVAALEYLFLFVEQPLCHVSISSSNIMFDDNFTAKLSDYGLLTCVGNPVMVTNSKDDSMRQKSGNIIYQLGVFILELVTGQSSEMEGSDLIEWIQESRFYSSIHKMVDPDLGDNYDSRELKTLLAVAKLCVKSRDKPVFTIPQLFRYLQHKVDIPRV 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3612 301 PANTHER OS01G0253100 PROTEIN 27 296 - -
Acco01g3612 301 Gene3D Phosphorylase Kinase; domain 1 12 114 - -
Acco01g3612 301 FunFam Protein kinase superfamily protein 18 114 - -
Acco01g3612 301 ProSiteProfiles Protein kinase domain profile. 34 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3612 301 Gene3D Transferase(Phosphotransferase) domain 1 211 300 - -
Acco01g3612 301 FunFam probable receptor-like protein kinase At1g49730 211 300 - -
Acco01g3612 301 Pfam Protein tyrosine and serine/threonine kinase 66 191 IPR001245 GO:0004672|GO:0006468
Acco01g3612 301 Gene3D Transferase(Phosphotransferase) domain 1 116 210 - -
Acco01g3612 301 SUPERFAMILY Protein kinase-like (PK-like) 26 269 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3612 Acco-ChrAcco01 52521728 52524079 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3612 27 297 Receptor kinase-like Gene Family AT3G19300 37.415 2.18e-58 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Acco01g3612 PK_Tyr_Ser-Thr 1.3e-16 CL0016