Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3607 ATGGAGGGTCCGGGGTCGGAAGAGAATAATAAGTCTGAAGTGCATTTGACTTCCGCTGCAGCCTTTGTGGAGGGTGGAATCCAGGATGCTTGTGATGATGCTTGTAGCATATGTCTTGAAGCATTTCATGAAAGCGATCCTTCAACAGTGACAAGTTGCAAGCATGAGTTTCATCTTCAATGCATTCTAGAATGGTGTCAAAGAAGCCCTCAATGCCCCATGTGTTGGCAACCCATCAGTTTCAAAGATCCATCGAGTCAGGAATTACTTGAAGCTGTGGGAAAAGAGAGAAATATTAGGTTGAATCCACCAAGAAATGCCACGATATTTCATCATCCAGCTCTGGGGGATTTTGAGTTACAACATTTGCCTGTTGGTGCAAATGATGCTGATCTTGAAGAGCGTATCATACAGCACTTAGCTGCTGCTGCAATGGGACGAGCACGCCATATTGCTAGAAGGGAAGGTCAGAGAAACAGGTCATCAGCTCAAGGTCGCCCACATTTTTTGGTATTTTCAACCCATCCTAATTCACCTCCCATGGCTCCTGCCTCTCCAACTCATGGGGCAAACGGTGAACCAGCTTCAGCAATCACTGTTGCTTCTCTATCTCAAACTCCTGCCACTGGGGAAGAATCATCACAGTCAACTTCTGTTCCTCTTGTACAAGCAGACCATATTTCTGCTTCAGGATCAGGATCTACTGTTCTTGCTGCTGATAACCATGGATCATCTTACAACAATAGGAGATCTCCTAGCCAGTCTTCTCCAAGCAGTCTGGACAGAGCAGGGCCATCAGAATTTCAATCATTTTCAGAATCTTTAAAGTCTAGATTTAATGCAGTTTCAACGAGATACAAAGAGTCAATATCCAGGAGCACCAGAAGTTGGAAGGAGAGATGGTTCTCTCGCAACAGCTCTATGTCTGATGTGGGATCCGAAGGTAGACAAGAGGTTAATGCAGGCATTGCAACTGTGTCACACATGATGGAACGACTTGATACCAGAGACAATAATAGAAATGACAGCAATCCTTCCCAAAGTCATTTAGAAGGTGGTTCGGTTGCTAATGATAGCAATCCTTCTCAAAGTCATTTAGAAGGTGGTTCGATTGATGGATCAAATGACCAACATATTTCAGATGCTGAAGGTGAAGGTTCATCAAGAGATTATGACACAAAAACATCCTTTGCAGCAGCTTTAATTTGGCTGAAAGAAATAGGATTTGCGCATTGCTGGACATGA 1245 0.4386 MEGPGSEENNKSEVHLTSAAAFVEGGIQDACDDACSICLEAFHESDPSTVTSCKHEFHLQCILEWCQRSPQCPMCWQPISFKDPSSQELLEAVGKERNIRLNPPRNATIFHHPALGDFELQHLPVGANDADLEERIIQHLAAAAMGRARHIARREGQRNRSSAQGRPHFLVFSTHPNSPPMAPASPTHGANGEPASAITVASLSQTPATGEESSQSTSVPLVQADHISASGSGSTVLAADNHGSSYNNRRSPSQSSPSSLDRAGPSEFQSFSESLKSRFNAVSTRYKESISRSTRSWKERWFSRNSSMSDVGSEGRQEVNAGIATVSHMMERLDTRDNNRNDSNPSQSHLEGGSVANDSNPSQSHLEGGSIDGSNDQHISDAEGEGSSRDYDTKTSFAAALIWLKEIGFAHCWT 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3607 414 MobiDBLite consensus disorder prediction 148 194 - -
Acco01g3607 414 MobiDBLite consensus disorder prediction 232 274 - -
Acco01g3607 414 SUPERFAMILY RING/U-box 28 82 - -
Acco01g3607 414 SMART ring_2 35 75 IPR001841 -
Acco01g3607 414 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 16 84 - -
Acco01g3607 414 FunFam E3 ubiquitin-protein ligase RHF2A 6 109 - -
Acco01g3607 414 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 11 84 IPR013083 -
Acco01g3607 414 ProSiteProfiles Zinc finger RING-type profile. 35 75 IPR001841 -
Acco01g3607 414 MobiDBLite consensus disorder prediction 335 391 - -
Acco01g3607 414 Pfam Ring finger domain 34 75 IPR001841 -
Acco01g3607 414 MobiDBLite consensus disorder prediction 340 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3607 Acco-ChrAcco01 52466476 52470584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3607 32 83 C3H Transcription Factor Family AT4G00335 46.154 3.05e-12 63.5