Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3604 ATGTTGTTTTGTGGAATGTCGTTGGAGGGATCGAAGTCAAGTGGGGTGCAGCTCAAGATCCTTAATTTTCCAGCTTTTGTGGATTCAATTCATCACTTTGTGAGCAAACTTAGTGACTTTGGACTTTGCAGTATATTATCCAATACTGAGACTTCATGTGATGATGATGATACTATAGAGTGTTGGAGAACTGGTCCAAAGGGTACTATAGTCTACATGGATCCTGAGTTTCTTGTTTCTGGCATTCTTACGCCAAAGTCAGATGTTTATTCATTTGGTGTCATGTTATTAAGATTGTTGACTGAGAGATCAGCCTTTGACATAACAAAGGAAGTTCAATACGCATTAGATACTGGAAAGTTTAAATCTCTCTTGGATCCTTTGGCAGGAGATTGGCCATTTGTGCAAGCTAAAGTGTTGTGA 423 0.3901 MLFCGMSLEGSKSSGVQLKILNFPAFVDSIHHFVSKLSDFGLCSILSNTETSCDDDDTIECWRTGPKGTIVYMDPEFLVSGILTPKSDVYSFGVMLLRLLTERSAFDITKEVQYALDTGKFKSLLDPLAGDWPFVQAKVL 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3604 140 Pfam Protein kinase domain 34 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3604 140 SUPERFAMILY Protein kinase-like (PK-like) 31 110 IPR011009 -
Acco01g3604 140 ProSiteProfiles Protein kinase domain profile. 1 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3604 140 Gene3D Transferase(Phosphotransferase) domain 1 18 137 - -
Acco01g3604 140 PANTHER OS02G0152300 PROTEIN 31 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3604 Acco-ChrAcco01 52446860 52448315 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3604 24 140 U-box Gene Family AT2G45910 56.780 1.41e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Acco01g3604 Pkinase 3.7e-11 CL0016