Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3580 ATGAAGGACTTTATGGCTGTGACTCGAATAATTTGGATTTGGATGATACTTTGTGGTCCTGCTCGTTCCCTAAAGCCAGCGTCTGTGAATATTGGTGCGGTTTTTACATTTGATTCGGTCATAGGTAAAGTTGCGAAGGTGGCGGTGAAAATGGCCGTTGACGACGTCAATGCAGACCCTCTAGTTCTTAAGGGGACGAAACTGAACTTGATAATGGAGGATGCCAGTTGCAACGTCTTCCTGGGATCGATTGGAGCGTTCCGTGCACTTGAGCAGGGGGTTGCGGCCATAATTGGTCCACAATCATCTTCCATCGCTCACGCGATTTCTCAAATTACTGATGGACTTCAAGTGCCTCAAGTCTCCTATGCTGCCACTGATCCAACCCTGTCTTCCCTCCAGTTTCCTTTCTTTTTTCGTTCAATACCAAGTGATTCTGAGCAAATGGCTGCAGTGGCTGATTTAATTGAATTCTATGGATGGAAAGAGGTCATTGCCGTCTACTTGGATGATGATTATGGGAGAAATGGAATATCTTCTCTGGATGATGAACTTGAAAAAAGGAGGATAAGGATGTCTCATAAGTTGCCTATTAGCATTAAGTTTGATCTAAATGAAATCACTAACTTGCTCAATCACTCCAAAGTGTTTGGTCCTCGTGTGTATGTTGTTCACGTCAACCCAGATCCTAGATTAAGGTTTTTCAACATAGCCTACAAACTGAAGATGATGTCTAGTGAATTTGTCTGGCTTGCCACTGATTCCCTCTCTGCTACTCTAGACTCGTTCACCCCACAGAATCATTCCTCTCTCAGTGTTGTGCAAGGGGTGGTTGCACTTCGTCCTCACATTCCTGATTCTCCCCAGAAAAGATCTTTTGTTTCTCAGTGGACAAAAATGCAGAATGAAAGCACAGCAAGCATTGGGTTAAACCATTATGGATTTTTTGCGTACGATACAATTTGGACTGTTGCGCATTCAATTGACAAGTTTATTGAAATACACAAGAATATTACATTCTCAGTCAATAATAACTCGGGGCTATTGAAAAAAGAAGCAGCTGATATACTGCTTGACAAGCTCAAAGTTTTCACAGGTGGATCTGATCTGATCAGCATATTATCGCAATCAAATTATACTGGTGTGACTGGTCGCTTTCAGTTTAGTCCAGACAGGAATATTGTTAGTGGTGGCTATGAAATTATCAATATCAACCAGACCGAAATTACGAGGGTTGGATATTGGTATAATGATTCTGGACTTTCAGTGGCACCACCTGAAACTCTTAAGAAGAAAGGACATGGCAGGGTTCCCCAAGATCAGAAGCTTAACAAGATCACTTGGCCAGGTGGAATGACAGGAAGACCACGTGGCTGGGTGGTTGCTGATCATGCAAGGCCACTGAGAATTGGAGTTCCCAAGAGAGCAAGTTTTGTTGAGTTTGTCACTGAGCTTCCTGGTAGTCATCAGATTCAAGGGTACTGCATTGATATTTTCAAGAAAGCACTGGATTTTGTGCCATACGATGTTCCTTATGTATTTATGCCTTTCGGGAATGGTCAGTCAAATCCCAATTATGACGCGCTTGTGAATATGGTTGCTGACAATGTATTTGATGCGGTTGTTGGAGACATAACAATTGTGACAAACCGTACACGTGTTGCGGATTTTTCTCAGCCTTTCACATCAACTGGTCTTGTTATAGTGGCTCCAATCAAGTATTCAAAATCAAGTGCTTGGGTATTTCTCAAACCGTTTACACCAGATCTGTGGTGTGTCACTGCAGCTTCATTTATAGTGATTGGGGCAGTTATATGGATTCTTGAGCACCGAATCAATGACGATTTCCGCGGTCCTCCTAAGAGGCAAATTCTGACGATGTGTATGTTCAGCCTCTCAACTCTGTTCAAGACAAATCAGGAAAAAACAGTAAGCACACTGAGTCGAATGGTGATGATAGTATGGTTTTTTCTGCTGATGGTGATCACGGCTAGCTATACAGCAAACCTGACTTCAATTCTTACAGTGGAGCAGCTTTCATCACCCATCACCGGCATTGATAGCTTGATTGCGACTAACTGGCCTATAGGTTACCAAGTAGGGTCATTTGCTTTCAACTATCTGAGACAGAATTTTAATGTACCAAAATCAAGACTTGTTGCTCTGGGTAACCCTGAGGAATATGCAAGAGCTCTGCAGCTAGGGCCTTCTCGTGGAGGGGTGGCAGCTATCGTTGATGAGCTTCCATACATAGAGTTATTTCTGTCAACACAAACTGATTTTGGCATTATTGGACAACAATTTACCAAAAGCGGTTGGGGATTTGCATTTCAAAGAGAGTCTCCTCTGGCTTTTGATATGTCTACAGCAATACTGAAACTCAGTGAGAACGGAGAGCTTCAGAGGATACGAGAGCGGTGGTTCTGTAAGATGGGTTGTCCTGAAGAAAGGAGAAGAGACTCGGAGCCTAACCGACTTCACTTGACAAGATTCTGGGGTCTATACCTCACATGTGGTACCGTCACTCTCGCTTCTTTCCTGGTGTTTCTGCTGCGAACAATTCGCCAATACATGAGATACAAGCAAAGGCAAAAAGATATTCCTTCTGGATCCCGTGAGGCATCTAGGGGTAAATGTTCCCACGTTATCTATAGCTTTTTTAATTTCATTGATGAGAAGGAAGAAGCCATCAAGAAAAGGTTCAGTCACTGTGAGAATCCAGAACAGGAGCCCACCTGA 2739 0.4308 MKDFMAVTRIIWIWMILCGPARSLKPASVNIGAVFTFDSVIGKVAKVAVKMAVDDVNADPLVLKGTKLNLIMEDASCNVFLGSIGAFRALEQGVAAIIGPQSSSIAHAISQITDGLQVPQVSYAATDPTLSSLQFPFFFRSIPSDSEQMAAVADLIEFYGWKEVIAVYLDDDYGRNGISSLDDELEKRRIRMSHKLPISIKFDLNEITNLLNHSKVFGPRVYVVHVNPDPRLRFFNIAYKLKMMSSEFVWLATDSLSATLDSFTPQNHSSLSVVQGVVALRPHIPDSPQKRSFVSQWTKMQNESTASIGLNHYGFFAYDTIWTVAHSIDKFIEIHKNITFSVNNNSGLLKKEAADILLDKLKVFTGGSDLISILSQSNYTGVTGRFQFSPDRNIVSGGYEIININQTEITRVGYWYNDSGLSVAPPETLKKKGHGRVPQDQKLNKITWPGGMTGRPRGWVVADHARPLRIGVPKRASFVEFVTELPGSHQIQGYCIDIFKKALDFVPYDVPYVFMPFGNGQSNPNYDALVNMVADNVFDAVVGDITIVTNRTRVADFSQPFTSTGLVIVAPIKYSKSSAWVFLKPFTPDLWCVTAASFIVIGAVIWILEHRINDDFRGPPKRQILTMCMFSLSTLFKTNQEKTVSTLSRMVMIVWFFLLMVITASYTANLTSILTVEQLSSPITGIDSLIATNWPIGYQVGSFAFNYLRQNFNVPKSRLVALGNPEEYARALQLGPSRGGVAAIVDELPYIELFLSTQTDFGIIGQQFTKSGWGFAFQRESPLAFDMSTAILKLSENGELQRIRERWFCKMGCPEERRRDSEPNRLHLTRFWGLYLTCGTVTLASFLVFLLRTIRQYMRYKQRQKDIPSGSREASRGKCSHVIYSFFNFIDEKEEAIKKRFSHCENPEQEPT 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3580 912 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 317 329 - -
Acco01g3580 912 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 102 130 - -
Acco01g3580 912 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 42 58 - -
Acco01g3580 912 FunFam Glutamate receptor 463 579 - -
Acco01g3580 912 Gene3D - 774 808 - -
Acco01g3580 912 CDD GluR_Plant 466 808 - -
Acco01g3580 912 SMART GluR_14 467 810 IPR001320 GO:0015276|GO:0016020
Acco01g3580 912 Pfam Ligand-gated ion channel 809 839 IPR001320 GO:0015276|GO:0016020
Acco01g3580 912 Gene3D - 144 421 - -
Acco01g3580 912 FunFam Glutamate receptor 705 812 - -
Acco01g3580 912 SUPERFAMILY Periplasmic binding protein-like II 446 808 - -
Acco01g3580 912 Gene3D - 47 396 - -
Acco01g3580 912 Pfam Receptor family ligand binding region 47 406 IPR001828 -
Acco01g3580 912 Pfam Bacterial extracellular solute-binding proteins, family 3 469 808 IPR001638 -
Acco01g3580 912 Gene3D - 580 706 - -
Acco01g3580 912 SUPERFAMILY Periplasmic binding protein-like I 26 459 IPR028082 -
Acco01g3580 912 Gene3D - 738 773 - -
Acco01g3580 912 FunFam Glutamate receptor 144 310 - -
Acco01g3580 912 CDD PBP1_GABAb_receptor_plant 30 425 IPR044440 -
Acco01g3580 912 FunFam Glutamate receptor 579 709 - -
Acco01g3580 912 PIRSF IGluLR_plant 1 911 IPR017103 -
Acco01g3580 912 Gene3D - 463 579 - -
Acco01g3580 912 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 29 868 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3580 Acco-ChrAcco01 52302576 52306963 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3580 5 912 Ion Channels AT2G32400 54.765 0.0 1008
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g0558 08 4491430 4497000 Acco01g3580 01 52302576 52306963 CCT
Acco01g3580 01 52302576 52306963 Acco01g3580 01 52302576 52306963 ECH