Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3577 ATGGCTGTGGCTCCACGGCTATTCCTCCTGTTTTTCTGGTTATGGATTCCCACAGAAGCTGTGGGTAGGACAGGAAATAGTACCATGACAAATAGTACAGTTTCTTCAAAACCAAATGTTGTGAGAATTGGAGCCCTGTTAACGTTTGATTCGGTCATTGGAAGATCTGCTAAACCTGCAATTTTGGCTGCTGCTGATGATGTTAATTCTGATACAAGCATTCTCAGCGGGATAAAGCTGGAAATTATTTTACATGATACCAACTGCAGTGGATTTCTTGGAATGGTAGAAGCTTTGCAGCTAATGGAGAATGATGTCGTTGCCGTGATCGGTCCACAGTCCTCTGGGATAGCTCATGTGATCTCTCATGTTGTTAATGAGCTTCATTTTCCTCTTCTCTCATTTGGGGCAACAGATCCTACTCTTTCTTCTCTGCAATACCCTTATTTCGTTCGCACTACGCAAAATGATCACTTCCAGATGTATGCAGTTGCAGACTTGATTCGTTACTATGGATGGAGCGAGGTAATAGCAATTTATGTGGACGATGATAATGGAAGAAATGGAATTTCTGTACTGGGCGATGCGCTTGCACAGAAACGTGCCAGGATCTCCTATAAGGCCGCGTTCCCTCCAGATGCTTCCAGAACTGCCATAAATGACCTGTTAAATGGAGTGAATTTAATGGAATCACGGGTCTATGTTCTGCATGTGAATCCTGATTCAGGTCTGGCAATTTTCTCTCTGGCCAAAAAGCTTGGGATGATGACCAATGGCTATGTTTGGATTGCGACTGATTGGCTTCCTTCAGTGCTTGATTCACAAGGACCAGCTAGCCTTGACACCTTGAATCATTTACAAGGTGTCCTTGCATTTCGTCATCACACTCCTTATACTGATATGAAAAATAATCTTCTCTCTAGGTTGAAGAAATTGAACAACACTAAGACTTCAGGCTTCAATTCTTATGCTTTATATGCTTATGATTCTATCATGCTAGCTGCCCGTGCTTTGCATGAATTTCTCGTTCATGGTGGAACCATTTCTTTCTCCAATGACCCTAACTTGCATGAAACTAATCGAAGTATGTTGCATTTATTGTCGCTTCGAGCTTTCAATGATGGCCCCAAGTTTCTCCAGACAATCCTGGGAATGAATTTCACTGGTGTTAGCGGTCAGATTCAGTTTGACAAGGACAAGAATTTGATTCGTCAAGCATATGATATTGTAAACGTTGGTGCATCTGGACCTCGTATTATTGGTTATTGGTCTAATCACTCTGGTCTTTCAGATGTAGTTCCTGAAGTCTTGTACTCAAAATCGCCTAACAAGTCTATTGGCAATAAGCATCTGTCCAATGTGATATGGCCAGGACTGACTTCAATTACACCCAGAGGATGGGTATTCCCCAATAATGGAAAGCCACTGAGAATTGCAGTGCCAAATCGAGTAAGCTTTAAGGAGTTTGTTGGCAAAGACAAGGACCCTCCTGGGGTAAATGGTTTTTGCATCGATGTCTTTGAAGCGGCGTTAAATTTAGTGGCTTATCCTGTCCCCAGGCAGTATATACTCTATGGACACGGTGATAGAAATCCTAACTATGATGAGCTTGTGAATCAGGTCGCACAAAATAATTATGATGCTGCTGTTGGGGATGTTACTATTGTCACAAACAGGACAAGGATTGTGGATTTCACTCAACCTTTCATGACTTCAGGGCTGGTTGTAGTTGTTCCTGTTAAAGAGGTAAAGTCAAGCCCCTGGTCTTTCCTTAAGCCATTTACTGCAGAAATGTGGTTTGTCACTGGTGCCTTTTTTCTTTTCGTGGGAGCTGTTGTGTGGATTCTTGAACATCGGCACAATCATGAGTTCCGAGGACGACCCAGGAAACAACTTATGACAATTTTTTGGTTTAGCTTCTCAACAATGTTCTTCTCACACAGAGAGAACACAGTGAGTACTCTAGGGAGATTGGTGCTGATCATTTGGCTATTTGTGGTGCTAATTATCAATTCAAGCTACACAGCTAGCTTGACATCCATACTCACGGTGCAGCAACTTTCATCACAAATTGAAGGCATTGACAGTCTCATCTCAAGCACTCAACCAATCGGTGTTCAAGACGGGTCATTTGCCCGAAAGTATCTCATAGATGAGCTCAACATAGCCGAATCAAGAGTCGTCATTTTGAAAAATCTGCAGGACTATATTGATGCCCTGACACGTGGACCCAGAAATGGAGGTGTGGTAGCCGTTGTGGATGAACTTCCTTATATTGAGCTCCTCATGTCCAGCACCAATTGTCAGTTCAGAACCGTAGGCCAAGAATTCACAAAAAGTGGATGGGGATTTGCATTTCAGAGGGACTCTCCACTGGCGGTGGACATGTCAACGGCAATTCTGCAACTATCAGAGAATGGTGACCTGCAGAAGATTCATGACAAATGGTTGTTAAAGGACGAATGTTCAGCAAGACAAAACGATGATGAAGATTCAAACCAGCTATCACTGAGTAGCTTCTGGGGGTTGTTCCTCATAAGTGGGGTGGCGTGTCTGCTTGCCTTGATTGCCTTCTGCATAAGGGTGTGTTGGCAGTTCGCAAAATTCGACCCGGACGTGGGTGAAGAGACCGACCGCGAAATTCAGCCACCGTTCAAAGACCCCAAGCCACGCCCATGTCGCACTCCTAGCTTCAAGGACCTGATGAATTTTGCTGATGAAAGAGAAGCTGTAATCAAAGAGCGTCTCAGAAAAAAGAGTAATAAACGTCCACGCTCCCAAAGGTCATTATAG 2793 0.4354 MAVAPRLFLLFFWLWIPTEAVGRTGNSTMTNSTVSSKPNVVRIGALLTFDSVIGRSAKPAILAAADDVNSDTSILSGIKLEIILHDTNCSGFLGMVEALQLMENDVVAVIGPQSSGIAHVISHVVNELHFPLLSFGATDPTLSSLQYPYFVRTTQNDHFQMYAVADLIRYYGWSEVIAIYVDDDNGRNGISVLGDALAQKRARISYKAAFPPDASRTAINDLLNGVNLMESRVYVLHVNPDSGLAIFSLAKKLGMMTNGYVWIATDWLPSVLDSQGPASLDTLNHLQGVLAFRHHTPYTDMKNNLLSRLKKLNNTKTSGFNSYALYAYDSIMLAARALHEFLVHGGTISFSNDPNLHETNRSMLHLLSLRAFNDGPKFLQTILGMNFTGVSGQIQFDKDKNLIRQAYDIVNVGASGPRIIGYWSNHSGLSDVVPEVLYSKSPNKSIGNKHLSNVIWPGLTSITPRGWVFPNNGKPLRIAVPNRVSFKEFVGKDKDPPGVNGFCIDVFEAALNLVAYPVPRQYILYGHGDRNPNYDELVNQVAQNNYDAAVGDVTIVTNRTRIVDFTQPFMTSGLVVVVPVKEVKSSPWSFLKPFTAEMWFVTGAFFLFVGAVVWILEHRHNHEFRGRPRKQLMTIFWFSFSTMFFSHRENTVSTLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISSTQPIGVQDGSFARKYLIDELNIAESRVVILKNLQDYIDALTRGPRNGGVVAVVDELPYIELLMSSTNCQFRTVGQEFTKSGWGFAFQRDSPLAVDMSTAILQLSENGDLQKIHDKWLLKDECSARQNDDEDSNQLSLSSFWGLFLISGVACLLALIAFCIRVCWQFAKFDPDVGEETDREIQPPFKDPKPRPCRTPSFKDLMNFADEREAVIKERLRKKSNKRPRSQRSL 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3577 930 Gene3D - 156 429 - -
Acco01g3577 930 SUPERFAMILY Periplasmic binding protein-like I 36 467 IPR028082 -
Acco01g3577 930 Pfam Ligand-gated ion channel 819 851 IPR001320 GO:0015276|GO:0016020
Acco01g3577 930 Gene3D - 587 708 - -
Acco01g3577 930 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 114 142 - -
Acco01g3577 930 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 327 339 - -
Acco01g3577 930 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 54 70 - -
Acco01g3577 930 PIRSF IGluLR_plant 2 930 IPR017103 -
Acco01g3577 930 Gene3D - 60 405 - -
Acco01g3577 930 FunFam Glutamate receptor 471 587 - -
Acco01g3577 930 Pfam Bacterial extracellular solute-binding proteins, family 3 533 818 IPR001638 -
Acco01g3577 930 FunFam Glutamate receptor 156 326 - -
Acco01g3577 930 Gene3D - 710 822 - -
Acco01g3577 930 FunFam Glutamate receptor 713 821 - -
Acco01g3577 930 Pfam Receptor family ligand binding region 58 412 IPR001828 -
Acco01g3577 930 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 41 891 IPR015683 -
Acco01g3577 930 MobiDBLite consensus disorder prediction 875 898 - -
Acco01g3577 930 FunFam Glutamate receptor 587 717 - -
Acco01g3577 930 CDD PBP1_GABAb_receptor_plant 42 432 IPR044440 -
Acco01g3577 930 CDD GluR_Plant 474 817 - -
Acco01g3577 930 Gene3D - 471 586 - -
Acco01g3577 930 SMART GluR_14 477 819 IPR001320 GO:0015276|GO:0016020
Acco01g3577 930 SUPERFAMILY Periplasmic binding protein-like II 453 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3577 Acco-ChrAcco01 52292257 52295849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3577 37 784 Ion Channels AT1G05200 68.316 0.0 1087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3577 01 52292257 52295849 Acco08g0558 08 4491430 4497000 CCT
Acco01g3577 01 52292257 52295849 Acco01g3577 01 52292257 52295849 ECH