Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3572 ATGTCTGAGTTCGACATAAAAATCCCAACTGCTTTTGATCCTTTTGCGGATGCAAATGCTGAGGATCCAGGTGCGGGGGCAAAAGAGTATGTGCATGTGCGGATACAGCAGCGAAATGCAAGGAAAAGCCTAACGACAGTTCAAGGGTTGAAGAAAGAGTACAGCTATAGCAAGATACTCAAAGACCTTAAGAAAGAGTTTTGCTGTAATGGTACTGTCGTCCAGGACCCTGAGTTAGGACAGGTCATACAACTTCAGGGAGATCAAAGGAAGAATGTTTCCACTTTCCTCATGCAGGCAGGCATTGTGAAGAAGGAGCAAATCAAGATTCATGGTTTCTGA 342 0.4444 MSEFDIKIPTAFDPFADANAEDPGAGAKEYVHVRIQQRNARKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLMQAGIVKKEQIKIHGF 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3572 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Acco01g3572 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Acco01g3572 113 SUPERFAMILY eIF1-like 6 113 IPR036877 GO:0003743|GO:0006413
Acco01g3572 113 FunFam Eukaryotic translation initiation factor SUI1 2 113 - -
Acco01g3572 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Acco01g3572 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 113 - -
Acco01g3572 113 NCBIfam translation initiation factor SUI1 6 113 IPR005874 GO:0003743
Acco01g3572 113 Gene3D - 1 113 - -
Acco01g3572 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3572 Acco-ChrAcco01 52259170 52259856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3572 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 86.726 2.54e-73 211