Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3566 ATGGAGTCCATTTGCCCAATAGACTCGCGGTGTGCCAATGAAATTGCAGCACTTCTCAGTCCTCCGTCACCTCTTCAAGTTCAGGAATATTATCATAAGGTTTTATCTACAAGGAAGTGCAGTAGTATCATAGTCAAACATGATGGAAACTTTGGAAAGGGTGTGTATGCTGCCGTGGACTTCAATGAAGAGGAGCTTGTTCTGAAAGATCAAATGCTAGTTGGGGTTCAACACTCTTCCAACAAGATTGGCTGTTTTGTCTGTAGCTCCTGCTTTTGCTTTATTGGTTCAGTAGAACTTCAAATTGGAAGGAGGCTTTACTTGCAAGCATTAGGGGCTTCTGAGAATCATGGTTGTGATATGAATGACTCTTCGAACACATCAAAATATAACCATGACACAGATTCATCTGATGGAGAAGACAATTCATATGAAAAAAAGGAGTACAGCGCTGGGGAATGTAGTTTTGGCGGTTCTGAAGCTAAAGTTCATCTCCCTGAAGGTGTTGTTCAATCACTAATGAACGGCCATATGAGGCTGCCTTACTCTAAGGAGTTCTCCTTGCCAGCAGCTGTTCCTTGCCCTGGTGGATGTGGAGAGTCATTCTACTGCAGCACATCATGTGCAGAGGCTGATTGGGAATCCTGTCATTCTTTGATTTGCACTGGTGAGTGGTCTGATACTGCACGGAGGGAGGCACTTCTAAAATTCATCAAACATGCTAATGAAACAAATGATATATTCCTCCTTGCTGCAAAGGCTATTTCTTCCACCATATTAAGGTACCACAAGTTAAAAGAAAGGTGTCTTTTAGAGAAAGGTAAACATGATAAATCACATATTTCAAACCATTGTGATCTCACTATTCTTTCAGAGGCTTGGAGACCTATAGCAATGGGACACAAGAGAAGGTGGTGGGACTGCATTGCATTGCCAGATGATATTAATTCTTCTGATGAAGTTGCATTCAGGATGCAAATAAGAGATTTGGCATTTGAGTCACTCCAACTTCTAAAGACAGCTATATTTGACAGAGAGTGTGAACCATTATTCTCCCTGGAAATATATGGGCACATCATTGGCCTGTTTGAGCAAAATAATCTTGATTTGGTGGTAGCTTCTCCTGTGGAGGATTACTTTCTATACGTCAACGATCTAACATATCCTGAAAAGGAAAAAGCTGAGGAAATTACACAGCCAATTCTGGATGCTCTCGGTGAAGACTATTCCATTTGTTGCCAGGGGACTGCATTTTTTCCATTGCAAAGTTGCATGAACCATTCCTGCTGTCCTAATGCAAAAGCATTCAAAAGAGAAGAGGATAGAGATGGTCAAGCAACGATAATTGCTCTGAGGTCCATTCGTAAAGGAGAAGAGATGACCATCTCATATGTCGATGAGGATCTTCCATACGAAGAGAGACAAGCTTCCCTTGCAGATTATGGTTTCAAATGCAGGTGTCCAAAGTGCGTTGAAGAACAACCATAG 1488 0.4167 MESICPIDSRCANEIAALLSPPSPLQVQEYYHKVLSTRKCSSIIVKHDGNFGKGVYAAVDFNEEELVLKDQMLVGVQHSSNKIGCFVCSSCFCFIGSVELQIGRRLYLQALGASENHGCDMNDSSNTSKYNHDTDSSDGEDNSYEKKEYSAGECSFGGSEAKVHLPEGVVQSLMNGHMRLPYSKEFSLPAAVPCPGGCGESFYCSTSCAEADWESCHSLICTGEWSDTARREALLKFIKHANETNDIFLLAAKAISSTILRYHKLKERCLLEKGKHDKSHISNHCDLTILSEAWRPIAMGHKRRWWDCIALPDDINSSDEVAFRMQIRDLAFESLQLLKTAIFDRECEPLFSLEIYGHIIGLFEQNNLDLVVASPVEDYFLYVNDLTYPEKEKAEEITQPILDALGEDYSICCQGTAFFPLQSCMNHSCCPNAKAFKREEDRDGQATIIALRSIRKGEEMTISYVDEDLPYEERQASLADYGFKCRCPKCVEEQP 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3566 495 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 13 494 IPR044237 GO:0008168
Acco01g3566 495 ProSiteProfiles SET domain profile. 285 465 IPR001214 GO:0005515
Acco01g3566 495 SUPERFAMILY SET domain 42 488 IPR046341 -
Acco01g3566 495 MobiDBLite consensus disorder prediction 122 144 - -
Acco01g3566 495 Pfam SET domain 398 464 IPR001214 GO:0005515
Acco01g3566 495 CDD SET_SMYD 404 490 - -
Acco01g3566 495 Gene3D SET domain 384 494 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco01g3566 SET 8e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3566 01 52221009 52228800 Acco01g3566 01 52221009 52228800 ECH