Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3556 ATGAAGATGATGACAAGATACAATTATGCAGTTATCTATGTAATTCTTCTTTGCGCGTTGGCTAGAGGAGGCTCCGAAGGTAAGAGGTTGGATCTGCATGATTTTCTCAATGAACAATGTCGTCATTTGTCTCCGTCACTTCTTCAAGATGGAAAAAAGTTTGAGGAAACTTGGAAACATTGTAGAAAAGAGTTGGTAGAGAGGAAGCATGGTGGGAGTCGAGAAACAGAAGCAGCAGGGAGCACTGATGAGCAGAGATCCTCACTTGGATTGCAACAAAACTTGCTGGATTGCATCATAACCAAAACTTCCAATAATGCCCCTGTTTCTCCACACAAGTACTTGACCAGGGGCAGTGAAAGACATTTGCTTGCTGATTCACCAGATGCCCAAATCCCACCCTCCACTTCTCCTTCTCCTTCTCCATCTCCATCTCCCTCGTCATCTTCATCATCTCCGCCTCCAATATCTCCTGCACTTGCAGGTCAATCACCAAGCCGTGATACAAAACCTTCCAATTCTCCTCCATCTTCTTATGATTTTTTGTTTCATCCGTCACCACCTCCTCCTCCTCCTCCTCCTGAACCCGATAACAGCAATAAAGCACAAAAAATAACGTTTATTGCTGCAGTAACGGTATGTGTAATCGCGGCATTATTGTTAATCTACCTCTGCTGGGGCGCCTCAACCAACAAAATCAACCCAAAAGAGGCACAACAAAGTGACGCAGCTACAGTCACATTAGTCTTGGATGATGTTTTTTATTGTCCACATAAGTCTGTTGTTTTGGAACAGTCTGACAAGAAAGAATCTTCTGCAAACGAAGGTGATCTGATCGCAAACTCTGAAGAAGGTTGGTCACTCATAACAACTGACAAGACTACACCGTTATCTAAAGGACAAATGGCTGATGACCCTCCTCTGACACCACCGCCGGGAAAATTAGATCCTCCGTCCCCGTCCCCGCCGCGGCCAGTTGCTCCTTGCTCCCCACCACCTCCACCTCCAAAAGCTAAGGCTCCACCTCTTCCTCGGAAACCGATTCACGGTAAAAATAAAGGACACGGCCACTCTGGCGAGGGTGATCAATCCGGAGCTCCAAAACCCAAATTGAAGCCATTTTTCTGGGACAAAGTTAATAAAGCTGATCAAGGAATGGTTTGGCAACAGATCGGTCAGGGGTCATTCCAGTTCAATGAGGAAATGATAGAGTCTTTATTTGGTTGCGGCAACCAGAACAAAAATCAAGGCAAGAAAGAAGCAACCTTTGAACCTTCAACTCAATACGTTCAGATTATTGACCCTAGAAAAGCACAGAATCTATCAATTCTCTTACGGGCGCTGAATGTGACAACCGAAGAAGTTGTTGATGCCCTTGACGAAGCAAGTGAGATTCCGGTTGAGATCATCCATGCGTTGCTGAGGATGAACCTAACAGCAGACGAGGAATTAAAGCTTAGATTATTCAATGGCAACCTGAATCAACTTGGCCCCGCTGAGAGATTCCTCAAGGTTTTGGTTGACATTCCCTTCGCTTTCAAACGACTTGAATATTTGATGTTCATGACTACCTATACGGAAGAGGTCTCAAGTCTCAAAGAGTCCTTTACAACACTAGAGGTTGCCTGCAACAACCTCAGAAAAAGCAGGTTATTCCTGAAACTATTAGAAGCAGTTCTAAAAACTGGCAACCGGATGAACGATGGCACCTATCGTGGCGGTGCTCAGGCATTTAAGCTTGACACACTATTGAAACTGTCTGATGTAAAAGGAACTGATGGCAAAACAACTCTGTTACACTTCGTGGTTCAGGAGATTATACGATCTGAGGGAATAAGAGCCGTACGAACACAGAAAGCAAGCCAATCCAGCGGCTCTAGTGTGAAAACCGATGATTCCCTTGATGATGCCAATGACGAATCAACGGCAGAGCATTATCGCAGACTTGGCCTTGAGGTGGTTTCAGGTTTGGGCGAGGAGCTGGAAGACGTGAAAAAGGCGGCAGTTATAGATGGTGAAGGCATAACAGTAACAGTTTCAAAACTTGGTCAGTCATTATTGAAGTCCAAAGAGTTCCTGAACCGTGAGATGAAGACTCTTGATGAAGATTCGGAATTCTGTCGTTTCTTGAAATGTTTTGTGGAGAAAGCAGACTCAGAGATCGCATGGCTGCTTGAGGAAGAGAAGAGGATAATGACTCTGGTAAAGAGCACAGGGGATTATTTCCATGGGACTGCAGGAAAAGACGAAGGGTTGCGTTTATTCGCGGTGGTACGAGATTTCTTGATAATGCTGGATAAGGCATGTAAAGAGGTTCAAGATTCAAACATGAAATCAGCGAAGGCTTCCAGGAAAGAGAGTCCAACCGCGTCCTCTGTTCCAGAAACTCGGCAGCCAAATGATATTCATCGGCGATTGTTTCCAGCAATCGCAGAGCGGCGCATAGCCTTCTCCGATTCTGACGAAGACAGCTCATCACCATAG 2484 0.4525 MKMMTRYNYAVIYVILLCALARGGSEGKRLDLHDFLNEQCRHLSPSLLQDGKKFEETWKHCRKELVERKHGGSRETEAAGSTDEQRSSLGLQQNLLDCIITKTSNNAPVSPHKYLTRGSERHLLADSPDAQIPPSTSPSPSPSPSPSSSSSSPPPISPALAGQSPSRDTKPSNSPPSSYDFLFHPSPPPPPPPPEPDNSNKAQKITFIAAVTVCVIAALLLIYLCWGASTNKINPKEAQQSDAATVTLVLDDVFYCPHKSVVLEQSDKKESSANEGDLIANSEEGWSLITTDKTTPLSKGQMADDPPLTPPPGKLDPPSPSPPRPVAPCSPPPPPPKAKAPPLPRKPIHGKNKGHGHSGEGDQSGAPKPKLKPFFWDKVNKADQGMVWQQIGQGSFQFNEEMIESLFGCGNQNKNQGKKEATFEPSTQYVQIIDPRKAQNLSILLRALNVTTEEVVDALDEASEIPVEIIHALLRMNLTADEELKLRLFNGNLNQLGPAERFLKVLVDIPFAFKRLEYLMFMTTYTEEVSSLKESFTTLEVACNNLRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIRAVRTQKASQSSGSSVKTDDSLDDANDESTAEHYRRLGLEVVSGLGEELEDVKKAAVIDGEGITVTVSKLGQSLLKSKEFLNREMKTLDEDSEFCRFLKCFVEKADSEIAWLLEEEKRIMTLVKSTGDYFHGTAGKDEGLRLFAVVRDFLIMLDKACKEVQDSNMKSAKASRKESPTASSVPETRQPNDIHRRLFPAIAERRIAFSDSDEDSSSP 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3556 827 MobiDBLite consensus disorder prediction 125 200 - -
Acco01g3556 827 MobiDBLite consensus disorder prediction 154 180 - -
Acco01g3556 827 MobiDBLite consensus disorder prediction 617 639 - -
Acco01g3556 827 PRINTS Proline rich extensin signature 146 162 - -
Acco01g3556 827 PRINTS Proline rich extensin signature 185 206 - -
Acco01g3556 827 PRINTS Proline rich extensin signature 132 144 - -
Acco01g3556 827 PRINTS Proline rich extensin signature 311 336 - -
Acco01g3556 827 ProSiteProfiles Formin homology-2 (FH2) domain profile. 361 791 IPR015425 -
Acco01g3556 827 SMART it6_source 361 780 IPR015425 -
Acco01g3556 827 MobiDBLite consensus disorder prediction 68 88 - -
Acco01g3556 827 SUPERFAMILY Formin homology 2 domain (FH2 domain) 374 783 - -
Acco01g3556 827 MobiDBLite consensus disorder prediction 181 198 - -
Acco01g3556 827 MobiDBLite consensus disorder prediction 776 803 - -
Acco01g3556 827 PANTHER FORMIN-RELATED 88 812 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Acco01g3556 827 MobiDBLite consensus disorder prediction 265 373 - -
Acco01g3556 827 MobiDBLite consensus disorder prediction 284 298 - -
Acco01g3556 827 MobiDBLite consensus disorder prediction 782 797 - -
Acco01g3556 827 MobiDBLite consensus disorder prediction 305 343 - -
Acco01g3556 827 MobiDBLite consensus disorder prediction 133 153 - -
Acco01g3556 827 Gene3D Formin, FH2 domain 370 799 IPR042201 -
Acco01g3556 827 MobiDBLite consensus disorder prediction 617 631 - -
Acco01g3556 827 Pfam Formin Homology 2 Domain 366 765 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3556 Acco-ChrAcco01 52166705 52170854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3556 326 773 FH2 protein (formin) Gene Family AT3G05470 46.358 1.41e-115 370