Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3555 ATGTCTCCAAAGCGTCGCCTTCAAGACCCACCTCCCGATGTTGCTGATTCTTCTTCAGCGGAAGATGAAGTGGAAGAATCGGAGAGCGGCACCGTTGAAGAGGAAGCCAACGGCGTTTCTGACGGCATAGAGCGCGAAGATGAAGAGACTGAAGGCGATGCTGAGGATGAATTAGCGGAGGAATCCGAAACCGAGTCCGACAAGTCTCAGCCCTCGCCATCCGTGTCGGACTTCACCATCAAGCCCATTGTTAGCAAGCCAACCGATGACCCATCGAAACCTCTGAAGCATGCAGCCAGCAACAATTCGGCTCCTGTGCCAGCAACGATCGTCCCTGCCGGAAGCTCAAAGCGCGCTCATGGGGGCAACACGGAGAAGAAAGAGTCTAAAAAGAAGAAGGTATCGGAAAGTCAAGATGAAGATGTTAAAAAGGAGTCTGGTGCCCAACGCCTTTGGAATGAGGATGATGAGATCGCGATCTTAAAGGGCTTGATGGATTACCATTCAAAGAGAGGTGTTGACCCATTCTCCGAGCTGTCGTTGTTTCATGAATACATGAAGAATAAGATCCATGCTGATGTATCTAAGTTGCAATTTGTGAACAAAATCAGGAGTCTGAAGAGGAAATTCCAAGCGAATGCAAAAAAGGGTGAAAACGGAGAGGACCCTGTTTTCTCTAAGTCCCATGATCAAGGAATTTTTGAGCTTTCAAAGAAACTTTGGGAATCTGCAGCTGCTAATGGAGTGGATCACAGGAAGCCAGTCCAGAACAAAGGCAAGAATTCTTCCAATTTAGGATCGCCAAAGCGGGAAGTGGCTGAGAATAGAGATGGGCCACATGGTGAGGTGAATGCCACGCCAGCAGAATCACGCTCTACATCATCCATCTTGGACGGGTTTCTGGTCTCGGGGAAGCTTTCGTTACCTGAATCTGCCATGGACATTGTGAAGGAAGCGATGCCTTTGATCGGGAGTTCGAAGGCCAAGCAGTTGGAACGAAGGGTTAAGGAATTGCAGAAGGAAGAATTCCAATTGTACTTAAAGAGGGTCGAATTGATTCATGATAGCGCAAAACTAGCACTGGATGGAATAAAATTTTCCATGTAG 1107 0.4788 MSPKRRLQDPPPDVADSSSAEDEVEESESGTVEEEANGVSDGIEREDEETEGDAEDELAEESETESDKSQPSPSVSDFTIKPIVSKPTDDPSKPLKHAASNNSAPVPATIVPAGSSKRAHGGNTEKKESKKKKVSESQDEDVKKESGAQRLWNEDDEIAILKGLMDYHSKRGVDPFSELSLFHEYMKNKIHADVSKLQFVNKIRSLKRKFQANAKKGENGEDPVFSKSHDQGIFELSKKLWESAAANGVDHRKPVQNKGKNSSNLGSPKREVAENRDGPHGEVNATPAESRSTSSILDGFLVSGKLSLPESAMDIVKEAMPLIGSSKAKQLERRVKELQKEEFQLYLKRVELIHDSAKLALDGIKFSM 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3555 368 MobiDBLite consensus disorder prediction 40 63 - -
Acco01g3555 368 MobiDBLite consensus disorder prediction 120 150 - -
Acco01g3555 368 Coils Coil 328 348 - -
Acco01g3555 368 MobiDBLite consensus disorder prediction 1 150 - -
Acco01g3555 368 MobiDBLite consensus disorder prediction 95 109 - -
Acco01g3555 368 MobiDBLite consensus disorder prediction 247 291 - -
Acco01g3555 368 Pfam Protein of unknown function, DUF573 149 242 IPR007592 GO:0006355
Acco01g3555 368 MobiDBLite consensus disorder prediction 16 32 - -
Acco01g3555 368 PANTHER BNAANNG10740D PROTEIN-RELATED 37 362 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3555 Acco-ChrAcco01 52163366 52164472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3555 54 273 GeBP Transcription Factor Family AT4G00390 35.965 4.63e-29 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Acco01g3555 DUF573 4.1e-31 CL0123