Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3551 ATGTGCCTACGTGCGTGCGGTTTCGAACTTCTAACAAGAGGTGAGACTTCCATGGGCGATGGAGGCGTCGCATGCATGCCTTTGCAGCAGCAGCATATTATGGAGAGATTGCCGAATGGAGAGAAAACGCTTTGCGGAGGCACGAATGGGAATGGGCTCAATTCTAAGTTGCTCAAGTTTGCTGGCAGTGATCGGAAGAAGAAGATGAAGGCGAGGAAAGAAGAGCCAGCTAAGAAATCTCATTTGGAAAGAAGTGAATTGGTATCGGACGGAGTAGACAAGAGCAACGATGAACTTGAGAATGATGGAGCGTACGTGGAAAAGGCACAAAAAGAAGAGATGGAAGAGGGTGAATTGGGGACTATGAAGGGGTCAAGAAATGACCTGGAAAATGGAGAGTTTGTTCCAGAGAAGCTGCGGAGAGGTGAAACTGAGAATGGAGAAATTGTTACTGAGAAATGTAAAAAAGGGGAGCTGGAGAAGGGAGAATCTGTTTATGGAAAATGGAGAAGAGAGGACGTGGAAAAGGGGGAGATAGTTCCAGAGAGGAGCCGGAAAGGAGAGGCGGATAAAGGGCAATGTGGCTTGGGTAAAGGTATTTTAGATGACATTGAGAAGGGAGAATTCATTCCTGATAGATGGCACCGAGGGGAAGTGGGAAAGGATGATTATGCTTACAGTAGAATGCGCAGGTACCAATCAGGCAGGGACAAAGGTTGGAAAAGTGAACGTGAGCGCACGTCACCTTCTGGGAGATATGCAGGTGGTGATTATATTAGAAAGAAGGAATTTAATAGAAATGGGGGTCAGCATGCCAAGAGTGCTCCTCGATGGGAGAGTGGGCCAGAGAGGAATGCAAGGATTAGTTCATTGATTGTGGATGAGGACAAAAATGAGCATAGCAATGGGAGGAACCATGCTCGGGAATACTCTGTGGGCAGTCGATTGAAGAGGCACGGGAATGATTCAGACAGCAGTGAGCGCAAGCACTATGGAGATTATGCTGGTTTAAAAAGTCGAAGGCTTTCTGATGACAGCTGCCGCCCTCTTTACCCAGAGCACTATTCTCACCGCCCTACAGAGAGGTCTTATCGAAATTCATCAAAAATATCTGTAGACAAGTACTCTCGGAATCATGAATCTTCTATACCTGCTAGACCAGCTTATGAAAGGCATGGATGTAGCCCTGGTCATTCTGAGCGATCTCCACGTGATCGTTCCAGGTATTATGATAATAGAGATCGTACTCCAATTCGTCGTGAGAGATCCCCACATGGCCGTGATAAGTCTCCATATGTTCGGGAGAAATCCCCCCATGGCCATGATAGATCTCCATATGTTCGAGAGAAATCACCCTATGGTCGTGAGAAGTCTCCATATGAAAAGAATTGGGATAGAAACCGTTACAATGATCATAAAACAAGAAGTCCAACTCATGCTGAGCGGTCCCCGCAAGACAGACGTCGACATCATGATCGTAGGGATAGGACGCCAAATTTGGTTGAACAATCCCCCTTTGATCGACCTAGGCTAAGTAGTATTCGAGAAAACAATTCTAGAATGATGTCAAGTGAAAAGCATGACTCACCTCATGGTTGCAAGGATCATGAAGATAAGCACGACCATAGGGAGTCAAATTGTTCAGGTGCAGATTCTCACAGTGAAAGAAATTTGGATGATGTAAATGGGTCTATTGAGAGAAGCAACAGTGAGAAGCCTGAAGAGGAAAACCAGTCCTGCAGCCCTACTGTAAGCTGCAAAGAATCTCCCCAGATTGAGCCACTTCCTGAAGAGCTGCCTTCTATGGAAGAAGATATGGACATTTGTGATACTCCTCCTCATGTTCCTGTGGTGGCGGGTTCGTCATCAGGGAAATGGTTTTACCTTGATTATAGTGGTGTAGAACATGGGCCTTCTAAATTATCTGACATCAAGGCTCTTGTTAATGAGGGGATACTGATGTCAGATCACTTTGTCAAGCACCAAGATAGTGACAGGTGGTTAACAGCTGAGAATGCAGCATCACCATTGACTGCACATAGTTTTCCATCCATTGTGCCAGACTCCATAACTCAGCTTGTAAACCCTCCAGAAGCTCCTGGTAATCTTTTGCTTGATACTGGAGATATCCTTCAATCTGGATCCGAGACTTTTCAGAAGATGCCAGCTCCTTTGCCGCAGCCAACTGTATGCCCCCATGACAGTGAGGTTGCATCTGAACCTTTAGAGGAATTCTGCATTGATGAAAGGGTCGGAGTTTTGTTAGAGGGTTATGATGTAATTCCTGGGAGGGAGGTTGAAGCGATAATAGATGCTTTGCAAATGAATTTTGTATATGCAGATTGGGAGGGAATTGGAGGCTATGAAGGCTTTCCCTGGCGTGATCATCTTCCAGGAAAAGAATGTGATTCAAGAACTGATTTTGCATCAAGGGACCCTGAGACTCAGTCAAGCATGCTCTTTGACAAGGATAGTGGACTTGCCTTTAGTGATCCTGGTGACTGGTTTTCTGCCAGATGGCCATGCAAAGGTGGTGACTGGAAGAGGAATGATGATGTCCAAGATAGATCTTCTAGGAAGAAACTAGTCTTAAATGATGGGTTTCCATTATGTGAAATGCCTAAATCTGGATGTGAAGATCCTCGCTGGCCTCAAAAAGACGACTTGTATTATCCTTCACAAAGCAGGAGGCTTGATCTCCCTCTCTGGGCTTTTTGTGCTGATGAGAGGGCTGACTGTGGTACTGTAAGCAGAACGTCTCAAACTAAATCCTTTTTGGCTAGAGGAGTGAAAGGAAATGTTCTTCCAGTGGTAAGGATAAATGCTTGTGTGGTCAATGACCAGGGATCATTGGTTTCGGAGCCAAGACACAAACCCCGGGTCAAGGACAGACATCATTCAAGGCCTACTCGCCCATTCTCTTCAAGCAGTGATAGCAAGAGATCATCAACTGAAGAAGATTCTCAGTCAAAAGCCATTAGCGATCAAAGTTCTTGCCTTACCACGGAATTTGTGAGCACTCCCAGAGACCGACTCTGTACGGTCTATGACTTACAGTTACATTGGGGTGACTGGTATTATCTTGATGGTTCTGGGCGTGAAAGAGGGCCTGCATCATTTCCAGAGCTGCAGGTTTTAGTAGATCAAGGAATTATAAAAAAACATAGCAGTGTTTTCAGGAAATGGGATAAACTTTGGGTTCCGGTTACCTCTGCTGTGGAAACTTCTGATACCAGTCTTGGGTGCCGCCGAGAAAGTAGCACAACAGCTGGCAAATGTTCTGGACTTCCATTGTTGCTAACTCAAGGTGTGTCATTCAGCGAACCTTGTACAAGCATCTGTTTGTTTGACCATGTACATCCTCAGTTCATTGGCTATACTCGTGGGAAGCTACATGAATTGGTAATGAAGTCATATAAGAGCCGGGAGTTTGCTACAGCTATAAATGAGGCTTTGGATCCCTGGATCAATGCAAGACAACCAAAGAAAGAAAATGAAAAGCAACTATATTGGAAATCAGAAGGTGATGCACGTGCTGCCAAAAGAGCTCGTATTCTGGTTAATAATAGCGAGGAAGACAGTGATATGGAAGATGGTACCTTGACTCTCCTGAAGAATGAATCCACTTTTGATGATCTATGTGGTGATGCTACTTTCCATGAAGAAGAAAGTGGTGTCACTAATTCTGAAGCTGGAAGCTGGAGTATGTTGGATGGTCATGTGTTGGCTCGAGTCTTCCACTATTTAAGATCTAATTTGAAGTCCCTTCTCTTTGCTTCATCGACTTGCAAGCATTGGAGAGCCGCTGTCATGTTTTACAGGGAAGTTTCAAGACAGGTCAATTTGTCATCCTTGACTCATTCTTGCACTGATTCCATACTGTGGAGCATTATGAATGGATATGAGAAAGACAAGATCAGATCTATGATTTTAGTTGGTTGCACCAGTATTAGTGCGGACATGCTTGAGAAGATTCTTCTTTCATTTCCTTTTTTATCTGCGATAGATATTAGAGGATGCAGCCAGTTTAATGAGTTGACTTCTAAATTTCCCAATGTGAAATGGATCAAGAGCCGAAATTCACGCATAAGCAAAACTGCAGAAGAGCCACATAAAACTAAAAGCCTTAGACAGATCACTGAGCAAACTTCATATGTTTCCAAGACCAGCAATCTAGGTGCCATGGATGATTTTGGTGAACTGAAGGACTACTTTGATAGTGTAGACAAGAGAGACACATCAAAGCAATTATTCCGTCGAAACTTATACAAGAGGTCCAAACTGTATGATGCCAGAAAGTCCTCTTCCATTCTATCTAGGGATGCTCGTACTAGACGATGGGCAATTAAGAAATCTGAAAATGGTTATAAAAGGATGGAGGAATTTATTGTTTCTGGTTTGAGGGAAATTATGAGGGAAAATCTCTGTGACTTTTTTGTGACCAAGGTTGCAGAAATTGAAGCTAAAATGAAAACTGGTTATTACAGTGGTCGGGGGTTGAGCTCTGTCAATGGGGATATCATCAGGATGTGTCGTGATGCAATGAAAGCAAAGAATCATGGTGATGCTGGTGATATAAATCATATTGTTACACTATTCATTCAACTTGCGACACAGTTGGAAGAAAGTTCCAAGTTTCTGAATGACAGAGATGCATCACTGAAGTTAGGGGAAAATGACTCAACATCCCTGTCTGGTTCCACTCCCTCAAAGTATAGGAAGAATAAATTGGTCACTGAGAGGAAGTATAGGAGTAATGGTGCACGTGGTAGTTTAGATAATGGAGACTGTATCTCTGATAGAGAAATTAGGAGACGTTTATTAAAGTTGAATAAGAAATCTTTTGATTCAGATGGTGAAACATCTGATGACATTGATATTTCTTCCGAAGATTACAAGAGTGACAATGAAACTACAACATCTGACAGTGAAAGTGACCAAGAAATCCATTCAGAAAGTCGAATTGGGGAGTCAAGAGGAGATGGACTCTTCACACCTGGTGAGGGTTTGAATTTTATAACTGATGATCGTGAATGGGGTGCTCGTATGACGAAAGCAAGTCTAGTTCCTCCAGTTACCCGGAAATATGAAGTCATTGACCAGTATCTCATTGTAGCTGATGAGGAGGATGTGCAGAGGAAGATGCGAGTTTCATTACCAGATGACTATGCAGAAAAACTGAATGCACAAAAAAATGGCACTGAGGAGTCGGATATGGAACTGCCTGAAGTCAAGGACTACAAACCAAGAAAACAGCTTGGAGATGAAGTTATTGAGCAAGAAGTTTATGGAATTGATCCTTACACGCACAATCTTTTGCTTGATTCTATGCCAGAGGAGTTAGATTGGTCTCTACAAGAGAAGCATTTGTTTATAGAAGACATGCTCCTTCGAACTTTGAATAGGCAAGTTAGTCATTTTACTGGAACAAGAAGCACTCCAATGAGCTACCCTTTGCAGCCTGTTATTGATGAAATTCAGAGGAGTGCTGAGGAGGACCGTGATGCAAGAATGGCTAGAATGTGTCAGGGTATCTTAAAGGCCATAGACAGTCGCCTGGATGACAAATATGTGGCTTATAGAAAGGGCCTTGGTGTTGTTTGCAACAAAGAAGAAGGATTTGGTGAAGATGATTTTGTTGTGGAGTTTCTGGGAGAGGTTTATCCTGTGTGGAAGTGGTTTGAGAAACAAGATGGAATACGCTCTCTGCAGAAAAATAGCAAAGATCCAGCTCCTGAATTCTATAATATTTACCTTGAGCGGCCAAAGGGTGATGCTGATGGATATGACTTAGTTGTTGTTGACGCCATGCATAAGGCTAACTATGCCAGTCGAATATGCCATTCGTGCCGGCCTAATTGTGAAGCAAAAGTTACCGCTGTCGACGGTCATTACCAAATTGGAATTTATACTGTTCGTAAAATACAACCTGGTGAGGAGATCACTTTTGATTATAATTCTGTCACAGAGAGCAAGGAGGAATATGAGGCTTCAGTGTGTTTGTGTGGAAGCCAAGTTTGTCGGGGGAGTTACTTGAATCTGACTGGTGAAGGCGCTTTCCAGAAGGTGCTGAAAGAGTGCCATGGAATTCTTGATCGTCATTATTTGATGCTTGAAGCTTGCGAGTTGAATTCTGTATCGGAAGAGGATTATAATGATCTGGGAAGAGCTGGTTTAGGCAGTTGTTTGCTTGGTGGCCTGCCAGATTGGCTAGTTGCTTATGCTGCTCGCCTTGTGAGATTCATCAATATGGAAAGAACTAAACTTCCTGAGGAAATTTTGAGGCATAATCTGGAAGAAAAAAGGAAATATTTTTCAGATATATGTCTTGAAGTTGAGAGGAGTGATGCAGAGGTTCAGGCTGAAGGTGTATACAACCAGAGGCTACAGAACCTTGCTGTCACTCTTGATAAGGTAAGATATGTTATGAGATGTATTTTTGGTGACCCACGGAAAGCACCACCTCCACTTGAAAAGCTCGGCCCTGAAGCAGCTGTTTCCTTTCTCTGGAAAGGAGAGGATTCGTTTGTTGAGGAGCTTCTTCAGTGCATGGCTCCTCATGTTGAAGAAGATGCCTTGAATGATTTGAAGGTCAGAATTCACTCTCATGATCCTTCGGGTTCTGGAGATATTCAAAAAGAGCTTCAGAAATCTCTGCTATGGTTGAGGGACGAGGTCAGAAATCTTCCTTGTACATACAAATGTCGGCATGATGCTGCTGCTGACTTAATTCATATTTATGCTTATACCAATTGCTTCTTTAGAATACGGGATTATCAAGCTATTACTTCTCCACCTGTCTATATTAGTCCACTTGACTTAGGTCCCAAGTATGCTAACAAGTTGGGAACAGGATTTCAGGAGTATCGAAAGACATATGGTGAAAATTATTGTTTAGGGCAGCTAATTTTTTGGCATAACCAGAGTAATGCAAATCCAGATAGTAGCCTGGCCAGAGCTCGCAGGGGCTGCTTGTCATTGCCAGATGTGGGTTCCTTTTATGCGAAGGCTCAGAAGCCATCACGGCATCGTGTTTATGGTCCTAGGACTGTCAGATCAATGCTGGCAAGAATGGAGAAGCAGCCGCACAGACCCTGGCCCAAAGACAGGTTATGGTCATTCAAAACTTCTCCAAAATTTTTTGGCAGCCCGATGTTAGATTCTGTAATCAATAATAACACTCCCCTGGACAGGGAAATGGTTCATTGGTTGAAGCACAGAAGAGCCGTATTCCATGCCATGTGGGACAGATGA 7254 0.4334 MCLRACGFELLTRGETSMGDGGVACMPLQQQHIMERLPNGEKTLCGGTNGNGLNSKLLKFAGSDRKKKMKARKEEPAKKSHLERSELVSDGVDKSNDELENDGAYVEKAQKEEMEEGELGTMKGSRNDLENGEFVPEKLRRGETENGEIVTEKCKKGELEKGESVYGKWRREDVEKGEIVPERSRKGEADKGQCGLGKGILDDIEKGEFIPDRWHRGEVGKDDYAYSRMRRYQSGRDKGWKSERERTSPSGRYAGGDYIRKKEFNRNGGQHAKSAPRWESGPERNARISSLIVDEDKNEHSNGRNHAREYSVGSRLKRHGNDSDSSERKHYGDYAGLKSRRLSDDSCRPLYPEHYSHRPTERSYRNSSKISVDKYSRNHESSIPARPAYERHGCSPGHSERSPRDRSRYYDNRDRTPIRRERSPHGRDKSPYVREKSPHGHDRSPYVREKSPYGREKSPYEKNWDRNRYNDHKTRSPTHAERSPQDRRRHHDRRDRTPNLVEQSPFDRPRLSSIRENNSRMMSSEKHDSPHGCKDHEDKHDHRESNCSGADSHSERNLDDVNGSIERSNSEKPEEENQSCSPTVSCKESPQIEPLPEELPSMEEDMDICDTPPHVPVVAGSSSGKWFYLDYSGVEHGPSKLSDIKALVNEGILMSDHFVKHQDSDRWLTAENAASPLTAHSFPSIVPDSITQLVNPPEAPGNLLLDTGDILQSGSETFQKMPAPLPQPTVCPHDSEVASEPLEEFCIDERVGVLLEGYDVIPGREVEAIIDALQMNFVYADWEGIGGYEGFPWRDHLPGKECDSRTDFASRDPETQSSMLFDKDSGLAFSDPGDWFSARWPCKGGDWKRNDDVQDRSSRKKLVLNDGFPLCEMPKSGCEDPRWPQKDDLYYPSQSRRLDLPLWAFCADERADCGTVSRTSQTKSFLARGVKGNVLPVVRINACVVNDQGSLVSEPRHKPRVKDRHHSRPTRPFSSSSDSKRSSTEEDSQSKAISDQSSCLTTEFVSTPRDRLCTVYDLQLHWGDWYYLDGSGRERGPASFPELQVLVDQGIIKKHSSVFRKWDKLWVPVTSAVETSDTSLGCRRESSTTAGKCSGLPLLLTQGVSFSEPCTSICLFDHVHPQFIGYTRGKLHELVMKSYKSREFATAINEALDPWINARQPKKENEKQLYWKSEGDARAAKRARILVNNSEEDSDMEDGTLTLLKNESTFDDLCGDATFHEEESGVTNSEAGSWSMLDGHVLARVFHYLRSNLKSLLFASSTCKHWRAAVMFYREVSRQVNLSSLTHSCTDSILWSIMNGYEKDKIRSMILVGCTSISADMLEKILLSFPFLSAIDIRGCSQFNELTSKFPNVKWIKSRNSRISKTAEEPHKTKSLRQITEQTSYVSKTSNLGAMDDFGELKDYFDSVDKRDTSKQLFRRNLYKRSKLYDARKSSSILSRDARTRRWAIKKSENGYKRMEEFIVSGLREIMRENLCDFFVTKVAEIEAKMKTGYYSGRGLSSVNGDIIRMCRDAMKAKNHGDAGDINHIVTLFIQLATQLEESSKFLNDRDASLKLGENDSTSLSGSTPSKYRKNKLVTERKYRSNGARGSLDNGDCISDREIRRRLLKLNKKSFDSDGETSDDIDISSEDYKSDNETTTSDSESDQEIHSESRIGESRGDGLFTPGEGLNFITDDREWGARMTKASLVPPVTRKYEVIDQYLIVADEEDVQRKMRVSLPDDYAEKLNAQKNGTEESDMELPEVKDYKPRKQLGDEVIEQEVYGIDPYTHNLLLDSMPEELDWSLQEKHLFIEDMLLRTLNRQVSHFTGTRSTPMSYPLQPVIDEIQRSAEEDRDARMARMCQGILKAIDSRLDDKYVAYRKGLGVVCNKEEGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYTVRKIQPGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKECHGILDRHYLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFINMERTKLPEEILRHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPRKAPPPLEKLGPEAAVSFLWKGEDSFVEELLQCMAPHVEEDALNDLKVRIHSHDPSGSGDIQKELQKSLLWLRDEVRNLPCTYKCRHDAAADLIHIYAYTNCFFRIRDYQAITSPPVYISPLDLGPKYANKLGTGFQEYRKTYGENYCLGQLIFWHNQSNANPDSSLARARRGCLSLPDVGSFYAKAQKPSRHRVYGPRTVRSMLARMEKQPHRPWPKDRLWSFKTSPKFFGSPMLDSVINNNTPLDREMVHWLKHRRAVFHAMWDR 2417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3551 2417 MobiDBLite consensus disorder prediction 1557 1573 - -
Acco01g3551 2417 MobiDBLite consensus disorder prediction 289 386 - -
Acco01g3551 2417 MobiDBLite consensus disorder prediction 520 574 - -
Acco01g3551 2417 MobiDBLite consensus disorder prediction 1615 1667 - -
Acco01g3551 2417 MobiDBLite consensus disorder prediction 1615 1657 - -
Acco01g3551 2417 MobiDBLite consensus disorder prediction 951 994 - -
Acco01g3551 2417 Gene3D Ribonuclease Inhibitor 1227 1353 IPR032675 -
Acco01g3551 2417 MobiDBLite consensus disorder prediction 61 149 - -
Acco01g3551 2417 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 441 2417 - -
Acco01g3551 2417 MobiDBLite consensus disorder prediction 130 149 - -
Acco01g3551 2417 SUPERFAMILY SET domain 1861 2009 IPR046341 -
Acco01g3551 2417 Pfam SET domain 1872 1986 IPR001214 GO:0005515
Acco01g3551 2417 Gene3D SET domain 1853 2017 IPR046341 -
Acco01g3551 2417 MobiDBLite consensus disorder prediction 393 501 - -
Acco01g3551 2417 MobiDBLite consensus disorder prediction 1557 1595 - -
Acco01g3551 2417 ProSiteProfiles SET domain profile. 1851 1986 IPR001214 GO:0005515
Acco01g3551 2417 MobiDBLite consensus disorder prediction 220 268 - -
Acco01g3551 2417 MobiDBLite consensus disorder prediction 61 123 - -
Acco01g3551 2417 SMART set_7 1852 1992 IPR001214 GO:0005515
Acco01g3551 2417 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1997 2417 IPR045606 -
Acco01g3551 2417 CDD SET_SETD2-like 1860 2008 - -
Acco01g3551 2417 MobiDBLite consensus disorder prediction 220 594 - -
Acco01g3551 2417 SUPERFAMILY F-box domain 1228 1270 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3551 Acco-ChrAcco01 52125164 52139453 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco01g3551 SET 8.3e-13 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3551 01 52125164 52139453 Acco01g3551 01 52125164 52139453 ECH