Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3547 ATGCGAATTACCTTGTTCTGTGCTTTCCTGTTCATTCAGTCAACTGAATTCACTCCCGGCAATCTTCGCGGCTCTCAGGTCCCAATCCAGAATTCCCAGACATCCTCGTTAAACATTGAACATAACGACGGCGAATGTAACGAAGGCTCCTTGGGAGTCAACGCTCCTGGCTCCATCCCTCAAACACAGGAGCGAAGTTGCATGCAGAAATTAGAGAAAGTCCATACTAACGGGGATGGATCTAAGTCCCTGGCAGAGAAGCTGGCGAGATGGAAGGAATATAATGCCCAGCTTGATTCCTGCAATGATGCAGATAAGCCGATTCGCAAAGTTCCTGCCAAAGGATCAAAGAAGGGATGCATGAAAGGTAAAGGAGGGCCTGAGAACTCTCGTTGTAACTACAGGGGCGTGAGGCAGAGGACATGGGGCAAGTGGGTTGCTGAAATTCGAGAGCCAAACAGAGGAAATAGGCTCTGGTTGGGTACATTCCCCACCGCCATTGCAGCTGCTCTTGCCTATGATGAAGCAGCAAGAGCAATGTATGGTTCTTTTGCTCGCCTCAACTTTCCCAATGTTTCAGTCTCCAATTTTTCTAATGAATCTTCAAGAGATTCAGTAGTTGCAAGTCAATCTGATTCTGCAGTGCCAACTGAGTCTGGGATCTCCCCAACCAATTCTGGCTTTGGTGAGTTAGACAATACCGACAAGAAACCTGTTCCCTTGAATGTAAAAGTTGAGGAGGTGGAAGTTGAACTGAGGATCAATTCCTCTACGCTTTCATGA 783 0.4725 MRITLFCAFLFIQSTEFTPGNLRGSQVPIQNSQTSSLNIEHNDGECNEGSLGVNAPGSIPQTQERSCMQKLEKVHTNGDGSKSLAEKLARWKEYNAQLDSCNDADKPIRKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPTAIAAALAYDEAARAMYGSFARLNFPNVSVSNFSNESSRDSVVASQSDSAVPTESGISPTNSGFGELDNTDKKPVPLNVKVEEVEVELRINSSTLS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3547 260 MobiDBLite consensus disorder prediction 107 128 - -
Acco01g3547 260 PRINTS Ethylene responsive element binding protein signature 156 172 IPR001471 GO:0003700|GO:0006355
Acco01g3547 260 PRINTS Ethylene responsive element binding protein signature 134 145 IPR001471 GO:0003700|GO:0006355
Acco01g3547 260 Pfam AP2 domain 132 182 IPR001471 GO:0003700|GO:0006355
Acco01g3547 260 FunFam Ethylene-responsive transcription factor 2 132 191 - -
Acco01g3547 260 SUPERFAMILY DNA-binding domain 133 190 IPR016177 GO:0003677
Acco01g3547 260 MobiDBLite consensus disorder prediction 205 231 - -
Acco01g3547 260 MobiDBLite consensus disorder prediction 205 242 - -
Acco01g3547 260 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 71 224 - -
Acco01g3547 260 SMART rav1_2 133 196 IPR001471 GO:0003700|GO:0006355
Acco01g3547 260 ProSiteProfiles AP2/ERF domain profile. 133 190 IPR001471 GO:0003700|GO:0006355
Acco01g3547 260 CDD AP2 132 192 IPR001471 GO:0003700|GO:0006355
Acco01g3547 260 Gene3D AP2/ERF domain 133 192 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3547 Acco-ChrAcco01 52069530 52075500 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3547 80 235 AP2-EREBP Transcription Factor Family AT2G40340 53.988 5.64e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco01g3547 AP2 3.4e-14 CL0081