Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3536 ATGGATAACATGAAGAAACCATGGTCCTGGATTTCAGTTCTCATCCTCTGCTTCTCTCTTCACATTCATTCTTCTTTTGGAGCTTTCACTGCCATCTCTGCAAATCAATCTCTTTCTGGCGATCAAACTCTAATCTCTCCAGGTGGTGTCTTTGAAATGGGATTCTTCAAGCCAGGTAATTCCTCTAATTACTACATAGGCATATGGTACAAAAAGGTCTCTCAAAGTCAAAGGGCCTATGTTTGGGTAGCTAACAGAAACGAACCTGTACCTGACAAATATTCGGCCAAGTTAGCAATATCGGATGGTCATTTAGTTCTGTTTGACGGGTCTCAGAAGATTGTTTGGTCAACAAACTTTACTTCTTCATCCTTAAGTTCTGTAGAAGCTGTTCTTCTTGACAGTGGTAATCTAGTTTTAAGAGATAGGCCTAACGCAACGGAGTTCCTATGGCAGACCTTTGATAATCCAACTGATACATGGCTTCCAGGAGGTAAAATAAGATTGGATAATAAAACAAAGCAGCCTCAATATCTCACTTCATGGAAGAATAGCGAGGACCCTGCAGAAGGCCTTTTCTCTCTAGAGCTAGACCCCCAAGGAAGCGCTGCCTATTTAATTCTTTGGAATAAGTCTGAAAGGTATTGGAGCAGTGGTTCTTGGAATGGACAAATTTTCAGTTTGGTGCCTGAAATGAGGTTAAATTATATCTACAACTTCACATTTGTGGCAAACGAAAACGAGAGCTATTTCACCTACACTGTGTATAATAGTTCTATTTTATCACGATTTGTGATGGATGTCTCAGGGCAAATCAAGCAATTTACATGGTTGGAACCTAGCCAGCAATGGAACTTGTTCTGGTCACAGCCAAGAAAACAATGTGAGGTTTATGCATTCTGCGGTCCATTTGGAATGTGTAACGAGAATTCCATGCCATCTTGTACTTGTTTACCTGGCTTTGAGACGAAGTTCCAAAGTAATTGGACTCTGAAGGATTACTCAGGCGGCTGTATGAGGAGAACAAAGTTGCAATGCGAGGACTCCAATTCTTCAAACGGAAAGAAGGACAAGTTCCAAGCAATGCCCAACATGAAATTCCCTGAAACACCATTATCTGCTAGAGCAGGAAATGCAGAGGAATGCCAATCAATCTGCTTGAGCAATTGTTCCTGTGCTGCTTATGCATATGATAGTAATGGGTGTTCAGTTTGGCACGGTGATCTCTTAAATCTGCAACAACTGTCCCAAGATGATAGCAATGGAGGAACTTTGTATCTCAGGCTTGCAGCTTCCGAGCTCCCTGACTCTAAAAATAATAAGGGGATGATTATTGGTATTGTTGCAGGCTCGGTGGGAGGCATAGGGATTCTCCTAACTATTCTTCTACTTGTGTTACTGAGGCGAAGAAAGAGAATTGTTCGGACAGGAAAATCCGTGGACGGTTCATTGATGGCATACGGGTATAGAGATTTGCAAAACGCGACAAGGAATTTCTCAGAAAAGTTGGGAGGAGGAGGTTTTGGTCCTGTATTTAAAGGAACATTGCCGGATTCTAGTGTTATAGCAGTGAAGAAGCTTGAAGGCATTGGCCAAGGTGAGAAGCAGTTCCGTACAGAAGTCAGTACAATTGGAACAATCCAACATGTAAATTTGGTCCGACTTAGAGGGTTTTGTTCTGAAGGAGCGAGAAAACTACTCGTCTATGATTACATGCCAAATAGTTCTTTGGATTCCTATCTATTTCGGGAAAAGAACTCTAAGGTATTCGACTGGAAAATGAGGTACCAAATTGCTCTTGGAACGGCCAGGGGGCTAACTTATCTCCATGAAAAGTGTAGAGATTGTATTATTCATTGTGACATCAAACCAGAAAACATTCTCCTTGATGCTGATTTTTGTCCAAAAGTTGCTGACTTTGGCCTCGCAAAGCTAGTTGGACGAGATTTTAGCAGGGTTCTGACAACCATGAGAGGAACAAGAGGTTATCTTGCTCCAGAGTGGATATCCGGGGTGGCTATCACAGCCAAAGCTGATGTCTATAGCTATGGCATGATGCTTTTTGAATTTGTGTCGGGTAGAAGAAACTCTGAGCCATCTGAAGACGGTCAAGTTAAGTTTTTCCCTACAAGGGCTACAAATGTTGTAGTCCAAGGTGGAAATATGCTTAGCCTATTAGACCCAAGCTTGGAGGGAGATGCAGACATGAATGAGGTTGCACGAATAGTAAAAGTTGCAGCTTGGTGTGTTCAAGATGATGAAACTCACAGGCCATCCATGGGTCAGGTGGTTCAAATTCTTGAGGGGGTGTCGGATGTGAATCTGCCTCCAGTTCCAAGATCCCTCCGATTGTTTGTTGAGGACCAGGCGAACATAGTGTTCTTCACTGAACCAAACTCAAGCTCCAATCAAAGCTCACAGGTAGGGAGCAACGTTTCAAGCTCAACAGCCTCCCCTCATACCTAA 2466 0.427 MDNMKKPWSWISVLILCFSLHIHSSFGAFTAISANQSLSGDQTLISPGGVFEMGFFKPGNSSNYYIGIWYKKVSQSQRAYVWVANRNEPVPDKYSAKLAISDGHLVLFDGSQKIVWSTNFTSSSLSSVEAVLLDSGNLVLRDRPNATEFLWQTFDNPTDTWLPGGKIRLDNKTKQPQYLTSWKNSEDPAEGLFSLELDPQGSAAYLILWNKSERYWSSGSWNGQIFSLVPEMRLNYIYNFTFVANENESYFTYTVYNSSILSRFVMDVSGQIKQFTWLEPSQQWNLFWSQPRKQCEVYAFCGPFGMCNENSMPSCTCLPGFETKFQSNWTLKDYSGGCMRRTKLQCEDSNSSNGKKDKFQAMPNMKFPETPLSARAGNAEECQSICLSNCSCAAYAYDSNGCSVWHGDLLNLQQLSQDDSNGGTLYLRLAASELPDSKNNKGMIIGIVAGSVGGIGILLTILLLVLLRRRKRIVRTGKSVDGSLMAYGYRDLQNATRNFSEKLGGGGFGPVFKGTLPDSSVIAVKKLEGIGQGEKQFRTEVSTIGTIQHVNLVRLRGFCSEGARKLLVYDYMPNSSLDSYLFREKNSKVFDWKMRYQIALGTARGLTYLHEKCRDCIIHCDIKPENILLDADFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEFVSGRRNSEPSEDGQVKFFPTRATNVVVQGGNMLSLLDPSLEGDADMNEVARIVKVAAWCVQDDETHRPSMGQVVQILEGVSDVNLPPVPRSLRLFVEDQANIVFFTEPNSSSNQSSQVGSNVSSSTASPHT 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3536 821 PIRSF SRK 3 818 IPR024171 GO:0004674
Acco01g3536 821 Pfam Protein kinase domain 500 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3536 821 Pfam PAN-like domain 354 411 IPR003609 -
Acco01g3536 821 Gene3D Transferase(Phosphotransferase) domain 1 572 775 - -
Acco01g3536 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 188 IPR036426 -
Acco01g3536 821 FunFam Serine/threonine-protein kinase 572 775 - -
Acco01g3536 821 SUPERFAMILY Protein kinase-like (PK-like) 482 803 IPR011009 -
Acco01g3536 821 SMART serkin_6 497 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3536 821 ProSiteProfiles Bulb-type lectin domain profile. 29 153 IPR001480 -
Acco01g3536 821 Pfam S-locus glycoprotein domain 216 324 IPR000858 GO:0048544
Acco01g3536 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 154 - -
Acco01g3536 821 ProSiteProfiles Protein kinase domain profile. 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3536 821 CDD B_lectin 35 157 IPR001480 -
Acco01g3536 821 CDD STKc_IRAK 503 769 - -
Acco01g3536 821 Pfam D-mannose binding lectin 80 183 IPR001480 -
Acco01g3536 821 SMART blect_4 35 157 IPR001480 -
Acco01g3536 821 Gene3D Hepatocyte Growth Factor 350 430 - -
Acco01g3536 821 ProSiteProfiles PAN/Apple domain profile. 346 430 IPR003609 -
Acco01g3536 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Acco01g3536 821 Gene3D Phosphorylase Kinase; domain 1 465 571 - -
Acco01g3536 821 PANTHER OS07G0415500 PROTEIN 13 779 - -
Acco01g3536 821 FunFam Receptor-like protein kinase 4 465 571 - -
Acco01g3536 821 CDD PAN_AP_plant 342 430 - -
Acco01g3536 821 SMART ntp_6 354 429 IPR003609 -
Acco01g3536 821 Gene3D - 28 154 IPR036426 -
Acco01g3536 821 MobiDBLite consensus disorder prediction 797 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3536 Acco-ChrAcco01 51980796 51983261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3536 478 777 Receptor kinase-like Gene Family AT5G20050 43.671 2.34e-78 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco01g3536 Pkinase 4.7e-46 CL0016