Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3531 ATGGTGAGAAGTCCCTTTTACGACAAAAATGGAGTGAAGAAAGGTGCGTGGAGTAGAGAAGAGGATGAAAAACTGAGAGCCTTTGTTCTGAGACATGGTCATACCAATTGGCGTCAACTCCCCAAGCTTGCAGGTTTAGCGAGGTGCGGAAAAAGTTGCAGACTTCGTTGGATGAACTACCTGCGACCAAATCTAAAACACGGCAACTACACTCAAGAGGAGGAGGAACTCATCATCAAATACCACCGACTACTTGGCAATAAATGGTCATTGATTGCTGAGAAACTACCAGGACGAACGGACAATGATATAAAGAACCACTGGCACAGCCAGCTCAAGAAGAACTTAAACCACTGTGACACTGGGAAGGAGGAGAAATACTTGAAGACGGCTGATTATACAGAATCTGAACGGACAAGTGAGTTTGTGGGTTCTGAATCAGAGAGTCATCACCATATACTGGAAAGCTCATGGGTATGGCCGGCTTCTTCAGAAACACGCGATAGCTGCACCCAAGAAAACCACTCAGACTCAAGCGTTGCACTTGCACAATCAACCATCACGTCTTGCGGGGAAGATCAGGACGCTAGTGTCGCGTCCTGCTGGGAAGCATCGCAAGAATTAATAAGTAGCGATTTTTGGAGCGGACCATTTTTAGTGGAAAATACATCTGCTTATGACATTTCCCCCCAAATGTTTTGGTGCCCTTACGTGGGTACGGATTTGAGTGACCTACACGGTTTTCTAGACTGTACTCAGTACCATGAGTTTTCGACAACCAAAGAGGGTGAACTTCGACAACGTGTACAGAAATTTCATCAGGTTGTTCTAACTCGTAACAAATCTGGTTTAATTTGA 858 0.451 MVRSPFYDKNGVKKGAWSREEDEKLRAFVLRHGHTNWRQLPKLAGLARCGKSCRLRWMNYLRPNLKHGNYTQEEEELIIKYHRLLGNKWSLIAEKLPGRTDNDIKNHWHSQLKKNLNHCDTGKEEKYLKTADYTESERTSEFVGSESESHHHILESSWVWPASSETRDSCTQENHSDSSVALAQSTITSCGEDQDASVASCWEASQELISSDFWSGPFLVENTSAYDISPQMFWCPYVGTDLSDLHGFLDCTQYHEFSTTKEGELRQRVQKFHQVVLTRNKSGLI 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3531 285 CDD SANT 16 61 IPR001005 -
Acco01g3531 285 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Acco01g3531 285 Pfam Myb-like DNA-binding domain 68 111 IPR001005 -
Acco01g3531 285 Gene3D - 69 141 - -
Acco01g3531 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Acco01g3531 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Acco01g3531 285 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 181 - -
Acco01g3531 285 SMART sant 66 114 IPR001005 -
Acco01g3531 285 SMART sant 13 63 IPR001005 -
Acco01g3531 285 FunFam Transcription factor RAX3 7 67 - -
Acco01g3531 285 Gene3D - 7 67 - -
Acco01g3531 285 CDD SANT 69 109 IPR001005 -
Acco01g3531 285 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco01g3531 285 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco01g3531 285 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3531 Acco-ChrAcco01 51934801 51937025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3531 1 131 MYB Transcription Factor Family AT1G06180 60.606 2.49e-52 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco01g3531 Myb_DNA-binding 1.7e-12 CL0123