Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3495 ATGGCCGCTGCGAATAACAGTGGTAAATCCACCGAGGGTGGTGGAGAAAGCCGTGATTGGGAGATTGAAAGGGGTAAAGATGTCGACTTGAGCGACGAGAGGCGGCGATGGAAGCCAGTTTTTGAGGATGCTTCCGTGTCAAACAGGCCTCTCAAGAAAATCCGAAGCCCCCAACGTCAAAACTCCAACCAAAATCAATCCTCTGTTCCCATTCTGCCACATCCTCCCTCCTCCCTTCCTTCCTCGTCTTCCAGAATCATCTTCCCTTTTGCCTTCGACGGCTCTCAACAGCCTCTGCAATATCCCCACCAACAATATGGCTCCGCCAATTTGCCGGCGTTTTGCCCACCGTTTCAGGCGATGCAAAATCAGCAGCAGTTGTTGTCTTTTGGGTCCCAACAGCCAAACATGGTGTACCCACAATTCTTAGCCCAAGACCCTGGAATCGCACCCCAGCAGCAACAGCAGCAACTTCTTCAGTATTGGAGAGATGCATTGAATCTGAGCCCGAGAGGAAGGATGATGAACAACGTAGGGCCGGACGGGAAGCCAATGTACAGGCCCCCTCCTCAGCCTATAAACACTACGAAGCTCTACAGAGGAGTGAGGCAACGGCATTGGGGAAAATGGGTGGCTGAGATTCGTCTTCCTCGAAACAGGACTCGCCTCTGGCTGGGAACATTCGACACAGCTGAAGATGCTGCCCTGGCTTATGATCGCGAGGCCTTTAAGCTGAGAGGAGAGAATGCAAGGCTCAATTTCCCAGAGCTGTTCCTCAATAAGGATAAGCCTTCATCATCAACAGCCCCAGATTCATCTCCTTCTTCTCCCTCCACTCCCCATCAAGGTTCAAGGTCGAAGCAAACTGACTCTGCTTCAGAAGGTTTCATTGTGGAGGAGAAGCCTTCGCAACCGCCACCACCAGAACAGAGCACCGACAATGATTCTGGAATTGGATCAAGTGACATTACAATGAGCGACGAAGTACAGCCTGCATCTAATACTGGAACAGTGGAGGGCACTTCGGTGGCGTCGCAGGAACTGGTTTGGGGAGAAATGGCGGCTTGGTTCAATGCAATTCCGGCGGGTTGGGGTCCGGGTAGCCCTGTGTGGGACGATTTGGACACGTTTCAGTCGCAGCTTCCTTCTTTCAATCCCAATCACCATGAATTTAATGTTGCAGATGCTCACAGAGAGCAAGAAGAAAACACAGGACCATCGGATTCTTCCACCTCCTCCTCTTCTTGTCCCGTGAGACCCTTCTTCTGGAAAGGTCAAGATTGA 1284 0.5156 MAAANNSGKSTEGGGESRDWEIERGKDVDLSDERRRWKPVFEDASVSNRPLKKIRSPQRQNSNQNQSSVPILPHPPSSLPSSSSRIIFPFAFDGSQQPLQYPHQQYGSANLPAFCPPFQAMQNQQQLLSFGSQQPNMVYPQFLAQDPGIAPQQQQQQLLQYWRDALNLSPRGRMMNNVGPDGKPMYRPPPQPINTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPELFLNKDKPSSSTAPDSSPSSPSTPHQGSRSKQTDSASEGFIVEEKPSQPPPPEQSTDNDSGIGSSDITMSDEVQPASNTGTVEGTSVASQELVWGEMAAWFNAIPAGWGPGSPVWDDLDTFQSQLPSFNPNHHEFNVADAHREQEENTGPSDSSTSSSSCPVRPFFWKGQD 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3495 427 MobiDBLite consensus disorder prediction 310 343 - -
Acco01g3495 427 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 5 374 - -
Acco01g3495 427 ProSiteProfiles AP2/ERF domain profile. 198 255 IPR001471 GO:0003700|GO:0006355
Acco01g3495 427 SMART rav1_2 198 261 IPR001471 GO:0003700|GO:0006355
Acco01g3495 427 MobiDBLite consensus disorder prediction 51 80 - -
Acco01g3495 427 MobiDBLite consensus disorder prediction 260 293 - -
Acco01g3495 427 MobiDBLite consensus disorder prediction 259 343 - -
Acco01g3495 427 SUPERFAMILY DNA-binding domain 198 256 IPR016177 GO:0003677
Acco01g3495 427 MobiDBLite consensus disorder prediction 14 42 - -
Acco01g3495 427 MobiDBLite consensus disorder prediction 381 427 - -
Acco01g3495 427 MobiDBLite consensus disorder prediction 405 419 - -
Acco01g3495 427 Gene3D AP2/ERF domain 198 256 IPR036955 GO:0003700|GO:0006355
Acco01g3495 427 MobiDBLite consensus disorder prediction 1 80 - -
Acco01g3495 427 CDD AP2 197 257 IPR001471 GO:0003700|GO:0006355
Acco01g3495 427 PRINTS Ethylene responsive element binding protein signature 199 210 IPR001471 GO:0003700|GO:0006355
Acco01g3495 427 PRINTS Ethylene responsive element binding protein signature 221 237 IPR001471 GO:0003700|GO:0006355
Acco01g3495 427 Pfam AP2 domain 199 247 IPR001471 GO:0003700|GO:0006355
Acco01g3495 427 FunFam Ethylene-responsive transcription factor 2 197 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3495 Acco-ChrAcco01 51672809 51674092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3495 1 373 AP2-EREBP Transcription Factor Family AT2G20880 40.102 1.10e-60 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco01g3495 AP2 3.1e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3495 01 51672809 51674092 Acco01g3495 01 51672809 51674092 ECH