Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3481 ATGCCCCTACATTGTTCGCAAACAAAGATGGAGCCTTTGCTGAAAGGCGAAAGCAGTGATCATAGGATGAGGTCGCCGGGGTTATTCCACCGTCGTTCACATGCTATCGCTTACGGCTCGCCCTCCGTGAAAGCGGCTGCGCTTGTGGATCTGGCTGAAGATGGCGTCGGCATCCCAGAGCAAGTATTGGATTCGTCGGAATTTCAGAGTTCTGCTGGATTTTATTTTATATTTATTAAATTAAACTTGCTCTGGTCACTTGGTTACTTTGCCTTGCTAGTCCTGAATTTCCTCGAGAAACCCTTGTGGTGTGAAAAGTATGCCGCTTACTCTTGCGATGATAGAGAGTATTTCTTTCTAGGACAACTGCCATATCTAACTGGTACAGAATGTGTTATTTATGAGGGCATAACTCTTCTTGTGCTCATTGTGCATATTTTTTTCCCGATATCCTATGAAGGCTCCGGCATATATTGGAAAAAAACTGTTAATCAATTGAAGGTACTGTGTCTGTTAGTTCTGGTTGCTGATATGGTGGTTTATGCTCTGTATTTGTCTCCAGTGACTTTTTATTCTCTACCTGTCAGATTTGCACCTTATGTCAGGGTTGTTCTTTTCATTTTACATATTAGGGAATTACGAGCAACCATGACCATCTTGGCTGGAATGCTTGGCACATACCTGAATGTCCTGGCTTTGGGGCTTCTGTTTCTTCTTTTCTCAAGTTGGGTGGCCTATGTGATGTTTGAAGATACACAGCAGGGGAAAATAGTGTTCACTTCGTATGGCACCACATTATATCAGATGTTTGTTTTATTTACCACATCCAATAATCCAGATGTTTGGATTCCTGCATACAAGGCTTCACGTTGGTATTGCCTGTTTTTTGTTCTCTTTGTGCTGTTGGGGGTTTACTTTGTCACAAACTTGGTCCTTGCCGTTGTTTATGACAGTTTCAAGAGTGAGCTTGCAAAACAAGTTTTTGAGATGGATCAAATGAGAAGAAATATGTTGGGGAAAGCATTTGATCTATTAGATAACAATCATGTTGGGTGTCTTAACAAAAACCAATGCATTGAACTCTTTCAGGAGCTGAACAAGTACAGGACTTTGCCAAATATCTCCCGGGAAGAATTTGAGCTGATATTTGATGAGCTGGATGATAGTCGTGATGTAAAGATCAACAAGGATGAATTTGCTGATATTTGCAATGCCATTGCTTTAAAGTTCCAGAAGGAGGATACTCCATCTTACTTTGAGTATCTTCCATGCTACCAAGCTCCCACCTCCAAGAAGTTGAAAGCATTTGTGAAGAGCCCGAAGTTTGGATACATAATATCCTTCATTCTTATATTGAATCTGATTGCTGTTATAATTGAGACAACGCTTGATATACAAAATAATTCTGCTCAAAAGGTGTGGCAAGTGGTTGAGTTTATTTTTGGATGGATATATGTAATAGAAATGGCTTTAAAAGTGTATTCATATGGATTCGAGAATTATTGGCGGGATGGTCAAAATCAGTTTGACTTTATCATCACATGGGTAATTGTCATTGGAGAAACTATAACTTTTGTTACACCTGATGACCCGGATCTTTTCTCAAATGGAGAATGGATTCGCTACCTTCTTCTTGCAAGAATGTTGAGGTTGATAAGGCTCCTAATGCATGTCCAGCAATACCGAGCCTTTGTGGCAACCTTCCTAACTCTCATACCAAGTTTGATGCCATACCTTGGAACCATATTTTGTGTCTTGTGTATTTATTGCTCCCTTGGTGTACAGATCTTTGGCGGAATTGTCAATGCTGGAAACCCCAAATTGGATGCAACAGGTCTTTCTGACAATGACTATCTGCTCTTTAATTTTAATGATTATCCAAATGGAATGGTTACACTTTTCAATTTGGTAGTCATGGGAAACTGGCAAGTATGGATGCAGGGCTACAAGGAATTAACGGGGACTTCTTGGACCTATATTTACTTTATTAGCTTCTACTTAATAACTGTTCTGCTGCTTTTGAATTTGGTTGTTGCTTTTGTCTTGGAGGCATTCTTTGCTGAAATGGAGCTTGAGACGTCTGCTGATTGTAGAGAAGAAGACGACAAGGAAGCTGAAGGAGAGAAACATCGGAGACGACGTGTTGGCACCAAAACACGTAGCCAAAGGGTTGATGCTCTTCTTCATCATATGTTGAGCTCTGAGTTATGTCAAGCACAGCCTTCCGATCCATAA 2235 0.4049 MPLHCSQTKMEPLLKGESSDHRMRSPGLFHRRSHAIAYGSPSVKAAALVDLAEDGVGIPEQVLDSSEFQSSAGFYFIFIKLNLLWSLGYFALLVLNFLEKPLWCEKYAAYSCDDREYFFLGQLPYLTGTECVIYEGITLLVLIVHIFFPISYEGSGIYWKKTVNQLKVLCLLVLVADMVVYALYLSPVTFYSLPVRFAPYVRVVLFILHIRELRATMTILAGMLGTYLNVLALGLLFLLFSSWVAYVMFEDTQQGKIVFTSYGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLFVLLGVYFVTNLVLAVVYDSFKSELAKQVFEMDQMRRNMLGKAFDLLDNNHVGCLNKNQCIELFQELNKYRTLPNISREEFELIFDELDDSRDVKINKDEFADICNAIALKFQKEDTPSYFEYLPCYQAPTSKKLKAFVKSPKFGYIISFILILNLIAVIIETTLDIQNNSAQKVWQVVEFIFGWIYVIEMALKVYSYGFENYWRDGQNQFDFIITWVIVIGETITFVTPDDPDLFSNGEWIRYLLLARMLRLIRLLMHVQQYRAFVATFLTLIPSLMPYLGTIFCVLCIYCSLGVQIFGGIVNAGNPKLDATGLSDNDYLLFNFNDYPNGMVTLFNLVVMGNWQVWMQGYKELTGTSWTYIYFISFYLITVLLLLNLVVAFVLEAFFAEMELETSADCREEDDKEAEGEKHRRRRVGTKTRSQRVDALLHHMLSSELCQAQPSDP 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3481 744 FunFam Two pore calcium channel protein 1 565 723 - -
Acco01g3481 744 Pfam Ion transport protein 133 321 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Acco01g3481 744 Pfam Ion transport protein 442 686 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Acco01g3481 744 SUPERFAMILY Voltage-gated potassium channels 439 685 - -
Acco01g3481 744 Gene3D - 319 403 - -
Acco01g3481 744 Gene3D - 212 318 - -
Acco01g3481 744 Gene3D - 565 727 - -
Acco01g3481 744 Gene3D - 431 564 IPR027359 -
Acco01g3481 744 MobiDBLite consensus disorder prediction 697 722 - -
Acco01g3481 744 MobiDBLite consensus disorder prediction 697 712 - -
Acco01g3481 744 ProSiteProfiles EF-hand calcium-binding domain profile. 374 409 IPR002048 GO:0005509
Acco01g3481 744 FunFam Two pore calcium channel protein 1 212 323 - -
Acco01g3481 744 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 11 740 IPR044581 GO:0005245
Acco01g3481 744 FunFam Two pore calcium channel protein 1 432 564 - -
Acco01g3481 744 SUPERFAMILY EF-hand 329 417 IPR011992 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3481 31 742 Ion Channels AT4G03560 69.565 0.0 1055