Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3462 ATGGCTTCGGTTTCATCCACTTCCTTTGTCACTTGTGTGCTATTCCTTCTTCTCTTGCACTCATCTTCCATCTTTAACAATCTTTGTGCAGCAAAACACGGTGCTGCCACCAACCGTCACCACCACCACCATACCCAGAATCCTCCATTAAACCCACGGCTTTACCGAGCTTTTCTTGCCCTCCAAGCATGGAAGCGCGTTATATACTCTGACCCACTTAACTTCACTCAAAATTGGGTAGGCCCTTCAGTCTGCAAGTATAATGGTGTTTATTGCGCCCCAGCACTAGATGATTATAAAGTCACGGTTGTGGCTGGCATTGATCTTAATTTTGGAGACATAGCTGGGTTCTTACCCAATGAACTAGGCCTGCTCTCTGATCTCGCTCTTCTTCATCTCAATAGTAATCGTTTTTGTGGCATCCTCCCAATGTCCCTAAGCAATCTTACTCTGCTCTATGAGCTTGATCTTAGCAACAACAGATTTGTAGGGTCATTTCCTTCTGTTGTGCTTTCCCTTCACACACTTCATTATCTTGACATTCGCTTTAATGAGTTTGAAGGGCCATTGCCTCCTCAACTATTCAACAAAACCTTTGATGCCATTTTCCTAAACAACAATCGCTTCACAAGTTCAATCCCAGCAAGTTTAGGCCAAAGCTCCGCCTCTGTGATCGTGTTTGCTAATAACAAATTTGGAGGGTGTCTCCCAGAGAGCATAGTCAACTTCGCTGATACCTTGGAAGAGCTGGTCTTGATAAACACAAGTTTGTCCGGTTGTTTGCCTCAGCAAGTTGGGTTTCTATATAAATTAAGAGTGTTGGATGTGAGCTTTAACAAACTTGTTGGTCCTATACCTTACAGTTTTGCAGGGCTGTCTCATTTGGAGCAGCTGAATTTGGGACATAACATGTTGAGTGGTGCAGTACCAATGGGGGTTTGTGAACTTCCAAACTTGAACAACTTCACGTTCTCTTATAACTTTTTCTGCGAGGAAGAGGGTATTTGTCAGAATCTGACGTCTAAGAACATTGTGTTTGATGATCGCCGGAATTGCTTGCCAGAGAAGCCATTGCAGAGGAGCCAAGAGGAATGCAATGCAGTACTCGAGCACCCAGTTGATTGTTTTGAGCTTTGCTGTATTGGAGGAGTCAGTTCTGGTTCAGTGGCTATTCCACCTGCTGCTTTAACTCCAATAGGAATGCCTGTTTCTCCACCAATTACTGCACCACCACATCCCTGA 1242 0.4428 MASVSSTSFVTCVLFLLLLHSSSIFNNLCAAKHGAATNRHHHHHTQNPPLNPRLYRAFLALQAWKRVIYSDPLNFTQNWVGPSVCKYNGVYCAPALDDYKVTVVAGIDLNFGDIAGFLPNELGLLSDLALLHLNSNRFCGILPMSLSNLTLLYELDLSNNRFVGSFPSVVLSLHTLHYLDIRFNEFEGPLPPQLFNKTFDAIFLNNNRFTSSIPASLGQSSASVIVFANNKFGGCLPESIVNFADTLEELVLINTSLSGCLPQQVGFLYKLRVLDVSFNKLVGPIPYSFAGLSHLEQLNLGHNMLSGAVPMGVCELPNLNNFTFSYNFFCEEEGICQNLTSKNIVFDDRRNCLPEKPLQRSQEECNAVLEHPVDCFELCCIGGVSSGSVAIPPAALTPIGMPVSPPITAPPHP 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3462 413 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 15 386 - -
Acco01g3462 413 Pfam Leucine rich repeat 246 305 IPR001611 GO:0005515
Acco01g3462 413 Gene3D Ribonuclease Inhibitor 58 219 IPR032675 -
Acco01g3462 413 Gene3D Ribonuclease Inhibitor 220 346 IPR032675 -
Acco01g3462 413 SUPERFAMILY L domain-like 58 341 - -
Acco01g3462 413 FunFam Leucine-rich repeat extensin-like protein 1 58 219 - -
Acco01g3462 413 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 244 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3462 Acco-ChrAcco01 51446142 51447383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3462 51 408 Trihelix Transcription Factor Family AT4G33970 54.121 1.04e-136 405