Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3460 ATGGATGAGACCAAACCAAAGACGGTGGTGAAGAGGGAGGCCTTGGGGGATTACAACGACAAGCAAAATGGATTCTTGTTGGGGGAAGATGACCTGAGGAAGTCGAGAGTGTCCGTGAAGAAGGGGTCTGCTGGCGGCGGAGGGAGTGGTCTGCGGTGTTGCCAAGCGGAGAACTGCTCGGCGGAGCTCAGTGATGCCAAGCCGTATCACAAGAGGCACAAGGTGTGCGAATATCATGCCAAGGCTCAGGAAGTGATTGTTTCCGGCATCCGACAACGTTTTTGTCAGCAATGCAGCAGATTCCATGAGTTAGGTGAGTTTGATGAGACGAAAAGAAGTTGTAGGAGGCGTTTGGCTGGGCATAACGAACGAAGAAGGAAGAGCTCAGTGAGCGAGACTGAGTCAGAAGGGTCGAGCCAGAAAAGAACAGGTACTCATCAGCTGAAGGACGGGGTTTATGGTGGTGGTGGTGGTGGTGATAGAGGCAGATCAATTCAGATCACCATATAA 510 0.5176 MDETKPKTVVKREALGDYNDKQNGFLLGEDDLRKSRVSVKKGSAGGGGSGLRCCQAENCSAELSDAKPYHKRHKVCEYHAKAQEVIVSGIRQRFCQQCSRFHELGEFDETKRSCRRRLAGHNERRRKSSVSETESEGSSQKRTGTHQLKDGVYGGGGGGDRGRSIQITI 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3460 169 ProSiteProfiles Zinc finger SBP-type profile. 51 128 IPR004333 GO:0003677
Acco01g3460 169 MobiDBLite consensus disorder prediction 118 169 - -
Acco01g3460 169 FunFam Squamosa promoter-binding-like protein 14 46 115 - -
Acco01g3460 169 Gene3D - 45 115 IPR036893 GO:0003677|GO:0005634
Acco01g3460 169 Pfam SBP domain 54 127 IPR004333 GO:0003677
Acco01g3460 169 SUPERFAMILY SBT domain 52 132 IPR036893 GO:0003677|GO:0005634
Acco01g3460 169 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 37 158 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3460 Acco-ChrAcco01 51437213 51438210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3460 27 141 SBP-box Gene Family AT1G53160 60.000 6.58e-43 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Acco01g3460 SBP 1.3e-31 No_clan