Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3451 ATGCTCGCGGTGTCACCTCTTGGAAGCACCAGAGATGAAGAAGGGCAAGGAGAGATGGAGAGATTTTCGATGGAGTCCCATGAATTCGGTGACCTTTCCGATGGGAATTTATTGGAAAGCATCAGCTTCGACGACATCTTTATCGGCATCAACGACGGAGATGTCTTACCGGATCTGGAAATGGACCCCGAGATCTTCGCCGACTTCTCCCTTAGCGCCTGCGAGGACTCGGAGATGGCCAAGTCATCGTTCTCGGTGGAAAACGTCAATAATAAAGTTGACCAGAATATAAGGACGACGTCGACGAAGAAAGAAGAGGAAGATAAAGCGTCCTCGTATTCGGGTTCGAATTCCGGAGAGGAGATAGTGAGCAAAAGGGATGACTCCGCGGAGGTTAAGCCGTCTCAGAAGGAAGGTGACAAAGGAAGAAAATCATCAGCCGAGTCAAAGAATTCTCAAGGCAAGAGAAAAGTGAAGGTGGACTGGACTCCAGAATTGCACAGGCGATTCGTGCAAGCAGTGGAGCAACTAGGAGTGGATAAGGCGGTACCTTCGAGAATATTGGAAATTATGGGAATTGATTGTCTCACTCGCCACAATATAGCCAGCCATCTTCAAAAATACCGATCCCACAGGAAGCATCTGTTGGCACGTGAAGCAGAAGCAGCAAACTGGAGTAAAAGAAGACAGTGTTATGGTACAGGAGGAGGCAAGAGAGAGGGAAGCCCCTGGCTCGCCTTAGCACCACCGACAATCGGTTTCCCTCCGGTGACGCCGCCGCCAATACAGCAATTCAGAGCTCTACATGTGTGGGGCCATCCCACCATGGACCACTCCTTCATGCCATTGTGGCCTAAGCATCTCCCTCCACACTCCCCCTCGCCACCTCCCATCGCCTGGGCGCCACCCACTCCTCCGCCTCCTCATCCTTCTTCCTATTGGCACCAACACGCTCCCAATGCACTAACGCCAGGAACACCTTGCTTTCCACAGCCTCTGACTAGAACGAGATTTCCCTCTCCAACTGTCCCGGGTATCTCTCCCCATGCCATGTTCAAAGTAGATCCGGGCATCTCCGTCTCCACCGCCCAACCCACTCCTCGCCCACTCATTGATTCTCATCCGTCAAAGGAGAGTGTAGATGCAGCTATTGGAGATGTTTTATCAAAGCCATGGCTGCCACTTCCTCTTGGACTTAAAGCTCCAGCGCTTGACAGCGTGATGGGTGAACTACAGAGACAAGGAATTCCGAAAATTCCGCCCTCTTGTGCTTGA 1275 0.5169 MLAVSPLGSTRDEEGQGEMERFSMESHEFGDLSDGNLLESISFDDIFIGINDGDVLPDLEMDPEIFADFSLSACEDSEMAKSSFSVENVNNKVDQNIRTTSTKKEEEDKASSYSGSNSGEEIVSKRDDSAEVKPSQKEGDKGRKSSAESKNSQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAANWSKRRQCYGTGGGKREGSPWLALAPPTIGFPPVTPPPIQQFRALHVWGHPTMDHSFMPLWPKHLPPHSPSPPPIAWAPPTPPPPHPSSYWHQHAPNALTPGTPCFPQPLTRTRFPSPTVPGISPHAMFKVDPGISVSTAQPTPRPLIDSHPSKESVDAAIGDVLSKPWLPLPLGLKAPALDSVMGELQRQGIPKIPPSCA 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3451 424 MobiDBLite consensus disorder prediction 13 27 - -
Acco01g3451 424 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 154 213 IPR017930 -
Acco01g3451 424 MobiDBLite consensus disorder prediction 1 27 - -
Acco01g3451 424 MobiDBLite consensus disorder prediction 291 313 - -
Acco01g3451 424 NCBIfam myb-like DNA-binding domain, SHAQKYF class 157 211 IPR006447 GO:0003677
Acco01g3451 424 Gene3D - 154 215 - -
Acco01g3451 424 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 423 IPR044825 GO:0003700|GO:0045893
Acco01g3451 424 Pfam Myb-like DNA-binding domain 160 209 IPR001005 -
Acco01g3451 424 MobiDBLite consensus disorder prediction 291 314 - -
Acco01g3451 424 MobiDBLite consensus disorder prediction 121 160 - -
Acco01g3451 424 SUPERFAMILY Homeodomain-like 155 214 IPR009057 -
Acco01g3451 424 MobiDBLite consensus disorder prediction 95 160 - -
Acco01g3451 424 FunFam Two-component response regulator 153 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3451 Acco-ChrAcco01 51366953 51369520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3451 1 331 G2-like Transcription Factor Family AT5G44190 41.261 2.00e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco01g3451 Myb_DNA-binding 5.4e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3451 01 51366953 51369520 Acco01g3451 01 51366953 51369520 ECH