Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3447 ATGCTTCTGCAACAAAAGATGGATGATACAGAAATTTCAAGTGGTTTTCCTCCTCATCAGAACCCAACTGATCATCTTCAGTCTAGTAATAACAATCCTCCTGTTTTGAAGAGGAAGAGAAACCTCCCAGGAAATCCAGATCCTGAAGCAGAGGTCATAGCCTTATCGCCGAAGACTCTGATGGCCACAAACAGATTCTTGTGTGAAATCTGTGGGAAGGGGTTCCAAAGGGATCAGAATCTTCAGCTGCATAGAAGAGGACACAATCTTCCATGGAAGCTGAAGCAGAGGACAAGCAAAGAACCAAGGAAGAGAGTGTATTTGTGCCCTGAGAAGACATGTGTGCACCATGACCCCTCAAGGGCTCTGGGGGACTTAACAGGGATAAAGAAGCACTTTTGCAGAAAGCATGGAGAGAAGAAGTGGAAGTGCGAGAAGTGCTCAAAGAGATATGCTGTCCAGTCAGACTGGAAAGCCCACTGTAAGACCTGTGGCACCAAAGAATACAAATGTGATTGTGGCACTACCTTTTCACGGAGGGACAGTTTCATAACGCACAGGGCGTTCTGCGATGCCTTAGCCGAAGAGACAGCAAGAGTGAATGCAGCGTCTACAATGGCCAACTCCTTTCTGGGTTACACCATCATTGGAAGCTCCCAAGGGCCTGCTGGCATAAGCATGACCACTCATTTTCCTTCCATTTTCAAGCCAATTCCAAATTCTAGTGTTGCAGAAACAAATCATCAAGCAACTAGTGGGCTCTCTCTATGGATGGCCCCAACTCAAACGTTAACGCGAGGTCCTCCTCAAACTCATCACGACACAATGGTCACTAATTTGAACACCAATAACAATGACGTGTTTGAGATTCATCATCAACTGGGATCAATCATCACTAGCTCATCATCATCAGGATCAATACTATACGGGAACAACCCACTTGCGTCATGCCCAAATCCTCAGCTGATGAATTGGGTGTTTGGGAGTGATCAAAATGAGAACGGTAGTGATCATCATCAAGATCAGCTGATCAGTGTTCCTTCTTTGTACAGCTCCCAACATCAGCAATCCCATCAAACATCCTCGGCAAACGTGTCGGCCACAGCTTTGTTGCAGAAGGCTGCTCAAATCGGGGCAACTTCAACCGACACGTCATTCCTGGGAACCTTAGGGCTGAAATGCCGCAACGGTAGTCAGGAACAAGAAGGGAACAAATTTTGCGGCATCTATGGTGCAGGTTCATCAATACTCGTATCTACCCTTGGAAGCGAGACGACAGAGAACCCTGCAAAACGCAGGAATATACAGCACAAAGAAGAGATCAGTAATAATGGAGGAGAGAAGACTAGAGATTTTCTGGGTGTGGGCGTAGAATCCATTTGCCACGATGCTCCAATCAACGGATGGATTTAA 1413 0.4628 MLLQQKMDDTEISSGFPPHQNPTDHLQSSNNNPPVLKRKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEPRKRVYLCPEKTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHCKTCGTKEYKCDCGTTFSRRDSFITHRAFCDALAEETARVNAASTMANSFLGYTIIGSSQGPAGISMTTHFPSIFKPIPNSSVAETNHQATSGLSLWMAPTQTLTRGPPQTHHDTMVTNLNTNNNDVFEIHHQLGSIITSSSSSGSILYGNNPLASCPNPQLMNWVFGSDQNENGSDHHQDQLISVPSLYSSQHQQSHQTSSANVSATALLQKAAQIGATSTDTSFLGTLGLKCRNGSQEQEGNKFCGIYGAGSSILVSTLGSETTENPAKRRNIQHKEEISNNGGEKTRDFLGVGVESICHDAPINGWI 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3447 470 SMART c2h2final6 142 162 IPR013087 -
Acco01g3447 470 SMART c2h2final6 66 88 IPR013087 -
Acco01g3447 470 MobiDBLite consensus disorder prediction 1 36 - -
Acco01g3447 470 SUPERFAMILY beta-beta-alpha zinc fingers 65 162 IPR036236 -
Acco01g3447 470 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 88 IPR013087 -
Acco01g3447 470 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Acco01g3447 470 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 27 458 IPR031140 -
Acco01g3447 470 MobiDBLite consensus disorder prediction 1 50 - -
Acco01g3447 470 FunFam protein indeterminate-domain 5, chloroplastic-like 120 199 - -
Acco01g3447 470 Gene3D Classic Zinc Finger 62 89 - -
Acco01g3447 470 Gene3D Classic Zinc Finger 120 200 - -
Acco01g3447 470 FunFam protein indeterminate-domain 12-like 45 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3447 Acco-ChrAcco01 51330381 51333039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3447 32 470 IDZ Gene Family AT1G03840 51.200 5.06e-137 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco01g3447 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3447 01 51330381 51333039 Acco01g3447 01 51330381 51333039 ECH