Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3433 ATGGCACAATTGCCACCCAAGATCCCAAACATGGCGCCCAATTGGCCTGATTTTTCTTCTCATCACAAGATGCCTTCCCTTGCAAGTTTGTCGCCAAATAATGCCGCCACCAACGCTGCTGCTACTACCGCCGCCGGCCATCAAAATCATTCTTGGGTGGACGAATTCCTCGACTTCTCGTCGGCCCGACGAGGGGCTCACCGGCGATCCGTCAGTGACTCCGTTGCCTTCATTGAGGCGCCAATACTGGACGATTGCCGTGGTAACCCCGGTGTGATTCCTCCGAGGTCTGGGGGCGACATTGAGTTTGATAGATTTGATGATGACCAATTCATTTCCATGTTCACTGACGATTTATCTGGGGCTCCCGTGCCTCCCACCATGTCGTCCTCGAATCCTTCAAGCCCTTCTGATAATAACAGCATTAACGATGAGGAAGAAAACGGCCAAAACCAGAACCAGTCGAAGGAGAACGAGCACGAGCAGCAGAAACAGGTGAAGAATGAATCGGTTGAGGTTGAAAACCAACGCCAACAGGAAACTCAAGCCTCAAATAACACTAACACTGCTTCTTCTGCTGACAAAATTACTGACCCTAAGAGAGTGAAAAGAATCCTGGCAAACAGACAATCTGCACAAAGGTCACGAGTGAGGAAGCTGCAATACATATCTGAGCTAGAACGAAGTGTAACTTCATTACAGGCTGAAGTTTCAGTGTTATCTCCAAGAGTTGCGTTTTTAGATCACCAACGATTGCTTCTAAATGTTGACAACAGTGCGCTGAAGCAAAGAATCGCCGCCCTTGCCCAGGACAAGATCTTTAAGGATGCACATCAAGAGGCTCTAAAGAGGGAGATAGAGAGACTGAGGCAAGTCTATCACCATCAGAACCTCAAGAAAATGGAAAATAACAATGCAGCAGCAGGGCCACCATCACCATCCTCATCTCCAAAACCAAACACAGAATGTGGTGCTAAGACAGAAAAGGAACAACTTCTCAATGTCTGA 1008 0.4792 MAQLPPKIPNMAPNWPDFSSHHKMPSLASLSPNNAATNAAATTAAGHQNHSWVDEFLDFSSARRGAHRRSVSDSVAFIEAPILDDCRGNPGVIPPRSGGDIEFDRFDDDQFISMFTDDLSGAPVPPTMSSSNPSSPSDNNSINDEEENGQNQNQSKENEHEQQKQVKNESVEVENQRQQETQASNNTNTASSADKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHHQNLKKMENNNAAAGPPSPSSSPKPNTECGAKTEKEQLLNV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3433 335 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 198 250 IPR004827 GO:0003700|GO:0006355
Acco01g3433 335 Coils Coil 279 299 - -
Acco01g3433 335 MobiDBLite consensus disorder prediction 175 195 - -
Acco01g3433 335 SUPERFAMILY Leucine zipper domain 200 254 IPR046347 GO:0003700|GO:0006355
Acco01g3433 335 MobiDBLite consensus disorder prediction 150 174 - -
Acco01g3433 335 MobiDBLite consensus disorder prediction 298 335 - -
Acco01g3433 335 Coils Coil 139 176 - -
Acco01g3433 335 SMART brlzneu 196 260 IPR004827 GO:0003700|GO:0006355
Acco01g3433 335 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 203 218 IPR004827 GO:0003700|GO:0006355
Acco01g3433 335 PANTHER BASIC LEUCINE ZIPPER 34 1 322 - -
Acco01g3433 335 CDD bZIP_plant_RF2 201 251 IPR044759 GO:0003700|GO:0006355
Acco01g3433 335 MobiDBLite consensus disorder prediction 116 202 - -
Acco01g3433 335 Gene3D - 199 270 - -
Acco01g3433 335 MobiDBLite consensus disorder prediction 123 149 - -
Acco01g3433 335 Pfam bZIP transcription factor 200 243 IPR004827 GO:0003700|GO:0006355
Acco01g3433 335 FunFam Basic leucine zipper 61 199 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3433 Acco-ChrAcco01 51242283 51244590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3433 1 277 bZIP Transcription Factor Family AT3G58120 57.616 9.24e-96 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco01g3433 bZIP_1 3.2e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3433 01 51242283 51244590 Acco01g3433 01 51242283 51244590 ECH