Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3407 ATGGCTGAGACACGAGAGGATTCAGGGCCCACAGAGCAAGGGCCCTCTAATGCTTCATGGTGGCCTTCAGAGTTCGTTGAAAAATTTGGATCCGTTTCTTTGGGATCTCAAGATGAGGCCTTAAACAATAAAGAATCACCTAGACATTCAGGGCAAGGTGATTTGTCACCTTATAGAGCATCTCAAATTCTCTGGCGCACTGGAATGCTTTCAGAACCAATACCAAATGGGTTTTATTCAGTCATTCCGGAGAAAAGACTCAAGGAGCTTTTTGTTAATATTCCTACTTTGGAAGAGCTTCTTGCTTTGGGAGGAGAGGGTTTTAGGGCTGATATCATTCTTGTGGATGCTGAAAAAGATAAAAAGCTATCCATGTTGAAGCAGCTGGTGGTGGCACTAGTTAAAGGATTGAACTCAAATCCAGCTGCAGTTATTAAGAAAATAGCTGGATTAGTTGCTGATTTTTACAAGCGGCCAAATGTAGAAAGTCCAGCAAAAGCTGCACTGGAAGAAACCTCCCACATGTTTGAGAGTCGAAGTGTCCAGTTGCTGGGGCAGATTAAGCATGGTTCATGTCGTCCTCGAGTGATCTTGTTTAAAGTTTTAGCTGATGCTGTAGGCCTTGAAAGTAAACTAATGGTGGGTTTGCCAGACGGTGGGGTACCTGAATGTGCAGATTCATACAAGCATTTATCTGTCCTAGTTGTATTAAATTCTGTGGAGCTATTGGTTGATCTCATGCGATTCCCTGGCCAATTATATCCGCAGTCAACCAAAGCAATTTATATGACGCATATTTCTGCAGCAGGAGAGAGTGATTCTGCGGAGAATGATTCCTGTGATTCGCCATTAGAACCCAACAGTCCTTTATATGGGGTTTCAGAGAGACTAGATATTGACAGTGCTGAAAGAGAGGAAAATCTCCAATTTCACAGAAGACATGAAGCATCTTCAAATTTATCAGGCATTTCTTTACGAAATGCTATGTTACGTTCAAATGTCATTCTGGACAATAAATTGAGTTTGTCTCATAGTGAACCCAACATTGCAACTGCGTTTGGTCGGCGTAGTCGGAGAAGGGTCATTGCTGAACAGAGGACAGCTAGTTCAAGTCCAGAACATCCCTCATTTCGAGCACGTGCGCAGTCCATGCTTAGCGGTGATAGGAAAACATTTAGAGATTTTGCTGATGACGGGGCTACATCAAGCTATAGGTCAAATGGTGTGCCCTCATCAGAAGCTCGTAGGATCAGAAGAAGAAGCATCAGCATTACACCAGAAATTGGTGACGATATCGTAAGGGCTGTACGGGCAATGAATGAAACACTAAAGCAGAATCGTCTTTTGAGAGAGCATAGGGATGATCGATCCTTCTCACATTCTCCAACGGATAGAAGTAGTGGTGGTGATCTTCAGAAAAATGTTTCAAACTTCCATCTTGGTCATGATGAAAGATCTGCTTTATATTCTCTTAAGCATGAGCAAGAATCTTCTCAAAAGGCAATGTCGTTACCCTCTTCGCCACATGAATATAGGGGTGAAGCATCTGGGAGATGCGGACCATCAGGATATGGAGTAAATAATGAGCTACAAGCAACTTGGAACAGAGTCCTCGAGTCTCCAATGTTCAATAATAAACCTCTGTTACCGTATGAAGAATGGAATATTGACTTCTCAGAACTAACTGTTGGGACTCGTGTTGGGATTGGGTTCTTTGGAGAGGTATTCCGAGGCATATGGAATGGAACAGATGTTGCCATAAAGGTTTTTCTGGAGCAAGATTTTACTACTGAAAACATGGAAGATTTCTGCAATGAGATAACAATTCTCAGCCGGCTTCGACATCCTAATGTTATTTTATTTCTTGGCGCATGCACAAAGCCTCCACGTTTGTCAATGGTTACTGAGTACATGGAGATGGGATCTTTGTATCACTTGATCCATTCAAGTGGTCAAAAGAAGAAGCTTAGTTGGCAGAGAAGACTGAAGATGCTACGTGATATATGCAGGGGGCTGATGTGCATACATCGTATGAAGATAGTTCACCGCGACCTGAAAAGTGCCAATTGTCTTGTGAACAAGCATTGGACTGTTAAGATCTGTGATTTTGGGCTTTCAAGAATAATGACAGAGTCTCCCATGAAAGATTCTTCATCAGCGGGAACTCCAGAATGGATGGCTCCTGAACTTATTCGAAACGAACCATTCACAGAAAAATGTGACATCTTTAGCCTGGGGGTCACAATGTGGGAGCTTTGCACTCTAAGCAGGCCCTGGGAAGGGGTACCACCTGAGAGGGTAATTTATGCCGTTGCTAACGAGGGATCCAGACTGGAGATTCCTGAGGGTCCACTGGGCAGGCTGATTTCAGATTGTTGGGCAGAACCTCATGAACGGCCGAGTTGTGAAGACATCCTTTCTCGTTTGCTTGACTGCGAATACTCATTGTGCTAA 2454 0.4336 MAETREDSGPTEQGPSNASWWPSEFVEKFGSVSLGSQDEALNNKESPRHSGQGDLSPYRASQILWRTGMLSEPIPNGFYSVIPEKRLKELFVNIPTLEELLALGGEGFRADIILVDAEKDKKLSMLKQLVVALVKGLNSNPAAVIKKIAGLVADFYKRPNVESPAKAALEETSHMFESRSVQLLGQIKHGSCRPRVILFKVLADAVGLESKLMVGLPDGGVPECADSYKHLSVLVVLNSVELLVDLMRFPGQLYPQSTKAIYMTHISAAGESDSAENDSCDSPLEPNSPLYGVSERLDIDSAEREENLQFHRRHEASSNLSGISLRNAMLRSNVILDNKLSLSHSEPNIATAFGRRSRRRVIAEQRTASSSPEHPSFRARAQSMLSGDRKTFRDFADDGATSSYRSNGVPSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLREHRDDRSFSHSPTDRSSGGDLQKNVSNFHLGHDERSALYSLKHEQESSQKAMSLPSSPHEYRGEASGRCGPSGYGVNNELQATWNRVLESPMFNNKPLLPYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDFTTENMEDFCNEITILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYHLIHSSGQKKKLSWQRRLKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMTESPMKDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVTMWELCTLSRPWEGVPPERVIYAVANEGSRLEIPEGPLGRLISDCWAEPHERPSCEDILSRLLDCEYSLC 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3407 817 FunFam Serine/threonine-protein kinase isoform 1 551 639 - -
Acco01g3407 817 MobiDBLite consensus disorder prediction 492 520 - -
Acco01g3407 817 ProSitePatterns Protein kinases ATP-binding region signature. 567 588 IPR017441 GO:0005524
Acco01g3407 817 SUPERFAMILY Protein kinase-like (PK-like) 535 809 IPR011009 -
Acco01g3407 817 ProSiteProfiles Protein kinase domain profile. 561 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3407 817 MobiDBLite consensus disorder prediction 447 461 - -
Acco01g3407 817 Pfam Ethylene-responsive protein kinase Le-CTR1 59 253 - -
Acco01g3407 817 MobiDBLite consensus disorder prediction 1 21 - -
Acco01g3407 817 SMART serkin_6 561 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3407 817 MobiDBLite consensus disorder prediction 447 476 - -
Acco01g3407 817 Gene3D Transferase(Phosphotransferase) domain 1 640 815 - -
Acco01g3407 817 Pfam Protein tyrosine and serine/threonine kinase 562 809 IPR001245 GO:0004672|GO:0006468
Acco01g3407 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 680 692 IPR008271 GO:0004672|GO:0006468
Acco01g3407 817 CDD STKc_MAP3K-like 567 809 - -
Acco01g3407 817 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 340 809 - -
Acco01g3407 817 MobiDBLite consensus disorder prediction 392 417 - -
Acco01g3407 817 Gene3D Phosphorylase Kinase; domain 1 554 639 - -
Acco01g3407 817 MobiDBLite consensus disorder prediction 36 55 - -
Acco01g3407 817 MobiDBLite consensus disorder prediction 36 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3407 Acco-ChrAcco01 51053024 51061360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3407 1 817 MAP Kinase Kinase Kinase AT3G58640 71.062 0.0 1190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Acco01g3407 PK_Tyr_Ser-Thr 1.4e-62 CL0016