Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3400 ATGGAGACGCATTATGAGTATAGAAGGAAGGCGCAGATTGCAATAATCGCCATTACAGTACTTACTTTTCTAGCTCTGATCGCATTGCTAGTTGCCCTCATTTACTACTGTTACAGGAGGATCAAGGTTCACCATCGCCGTGAGAACCAATCATATGCTGGCCATAACGGGGAAAGTGACTTAGCAAATCTGCAAGTTGTTGCTGATAATGGGCTTCAAGTGTTCACTTACAAGCAGTTGCATTCTGCAACCAATGGCTTTAGCAAGTCAAATGTATTTGGCCATGGTGGATTCGGACTTGTCTACCGGGGACTGCTTTACAATGGCGGAAATGTCGCAATTAAATTCATGGATGAGGCAAAAAAGCAAGGAGAAGAAGAATTTAAAATAGAGGTGGAATTGCTGGGTCAGTTGCGCTGTCCATATTTGCTGAAACTGATTGGGTATTGCACTGATAATAATCATAAATTGCTGGTTTATGAGTTCATGGCAAATGGGAATCTGCAAGAACATCTTTATCCTATCAGCAATTCGTATGTCACACCCATGAAATTGGATTGGAATACCCGGTTAAGAATAGCCCTACAGGCTGCTAAGGGTTTGGAGCATCTTCATGAACAAGTGAGCCCCCCAGTTATCCACAGGGATTTCAAGAGCAGTAACATCCTCTTGGACAGACAATTTCATGCAAAAGTTTCTGACTTTGGATTAGCCAAGCGTGGAACCGATAAAGCTGGGGAACATGTTTCGACTCGAGTTTTGGGCACGCACGGATATGTTGCCCCTGAATATGCACTAACTGGGCACTTAACAACCAAATCAGATGTATACAGTTATGGAGTTGTACTCCTCGAGCTGTTAACCGGTCGTGTACCGGTTGATATGGAGAGACCTCCTGGGGAAGGTGTTCTTGTTTCTTGGGCCTTGCCCCTATTGAATGATAGAGGAAATGTTGCAAAGATTATGGATCCTGCACTGGAAGGTCAGCACTCAATGAAAGAAGTTATCCAGGTAGCCGCCATTGCTGCACAGTGTGTACAGCCAGAGGCAGATTATAGGCCTCTCATGGCAGATGTTGTACAGTCATTGGCTCCACTGGTGAAGAAGACCCACAGGGCGACAACCTCAAAGGTTGGTAACTACCCAAGCTCCCACCTCTGA 1161 0.4505 METHYEYRRKAQIAIIAITVLTFLALIALLVALIYYCYRRIKVHHRRENQSYAGHNGESDLANLQVVADNGLQVFTYKQLHSATNGFSKSNVFGHGGFGLVYRGLLYNGGNVAIKFMDEAKKQGEEEFKIEVELLGQLRCPYLLKLIGYCTDNNHKLLVYEFMANGNLQEHLYPISNSYVTPMKLDWNTRLRIALQAAKGLEHLHEQVSPPVIHRDFKSSNILLDRQFHAKVSDFGLAKRGTDKAGEHVSTRVLGTHGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMERPPGEGVLVSWALPLLNDRGNVAKIMDPALEGQHSMKEVIQVAAIAAQCVQPEADYRPLMADVVQSLAPLVKKTHRATTSKVGNYPSSHL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3400 386 Gene3D Transferase(Phosphotransferase) domain 1 163 382 - -
Acco01g3400 386 FunFam Receptor-like serine/threonine-protein kinase ALE2 163 380 - -
Acco01g3400 386 SUPERFAMILY Protein kinase-like (PK-like) 70 363 IPR011009 -
Acco01g3400 386 ProSiteProfiles Protein kinase domain profile. 87 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3400 386 FunFam Serine/threonine-protein kinase PBS1 54 162 - -
Acco01g3400 386 Pfam Protein tyrosine and serine/threonine kinase 90 363 IPR001245 GO:0004672|GO:0006468
Acco01g3400 386 Gene3D Phosphorylase Kinase; domain 1 48 162 - -
Acco01g3400 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Acco01g3400 386 CDD STKc_IRAK 94 366 - -
Acco01g3400 386 PANTHER OS07G0668900 PROTEIN 66 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3400 Acco-ChrAcco01 50989517 50991459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3400 1 384 Receptor kinase-like Gene Family AT3G58690 70.833 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Acco01g3400 PK_Tyr_Ser-Thr 2.8e-44 CL0016