Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3396 ATGTCAAGATCATATACAAATCTTTTGGATTTGGCTTCAGGGAATTTCCCAGCAATGGACATGGAGGTTAAAGAAAGAAAGCGGCTGCCAAGAGTTATGACTGTCCCTGGGATAATTTCAGAACTTGATGACGATCAGGCACATAGTGTTTCTTCTGATAATCCATCAACTGTTTCTACAGTTAGGATGATCATTGTAGCTAACCAGCTTCCTTTGAAAGCAAGTCGAAATGAAGATAATAAGGGGTGGAGTTTCAGTTGGAATGAAGATTCATTGCTTTTACAGCTTAAAGATGGATTTCCTGAAGATATGGAGGTTCTTTATGTTGGGTCATTGCGGGTTGTTGTTGATCCAGCCGAACAGGATGATGTGTCACTGTGTTTATTGGACAAATTCAATTGTGTTCCTACTTTTCTGCCCCCGGATGTTTTGACTAAATTTTATGATGGTTTCTGCAAAAAGCAGTTATGGCCACTGTTTCATTACATGTTACCTTTCTCAACTGACAAAAACCACCGGTTTGATCGTTCTTTGTGGGAAGCTTATGTCATGGCAAATAAGATATTTTTTCAGAAGGTAGTTGAGATAATAAACCCAGAGGATGATTATATTTGGATTCATGATTATCATTTGATGGTACTGCCAACTTTTATTAGAAGACGTTTTAACAGAGTGAAAATGGGGTTTTTTCTCCATAGCCCCTTTCCATCTTCAGAGATATATAGGACTCTTCCTGTGAGGGAAGAGATACTTAAAGCTTTACTTAATTCTGATATAATTGGTTTCCACACCTTTGACTATGCTCGTCACTTCCTGTCCTGTTGCAGTCGTATGTTGGGCCTGGAGTATCAGTCAAAGAGGGGCTACTTGGGATTGGAATATTATGGAAGGACTATAAGTATTAAGATTATGCCAGTTGGGGTTCACATGGATCGTATTAAAATAGTCATGAGAATGGCACATGAAGAGTCTAAAGTGAAGGAGCTGAAACAGCAATTTGAAGGAAAAACTGTCTTGCTTGGTGTTGATGATATGGACGTTTTTAAAGGTATTGATTTGAAGATTTTGGCTATGGAACAGATGCTCATTCAACATCCTGAATGGCAAGGAAGAGCTGTTTTGGTCCAGATAGTAAGTCCTGCTAGGGGTGATGTTATGCATCTAGAGGGCATGCGGGCTGAAATACAAGAAAGCTGCAGTAGGATCAACAGAGCATTTGGGTGTCCTGGTTATGAACCTATTCTTTTTATAGATAGACCACTTTCAGCTGCAGAAAAAGCTGCTTATTATAGCATTGCTGAATGTGTTGTTGTCACAGCTGTAAGAGATGGGATGAACCTAACTCCTTATGAATATATTGCTTGTAGACAGGAAATGCCTGGTTCTGAATCATGTAACAATGCCAATGGCTCAAAGAGCATGCTAGTGATATCAGAATTTATAGGGTGTTCTCCATCACTTAGTGGGGCTGTCCGTGTTAATCCATGGAATGTTGAAACAACTGCTGAGGCAATGAATGAGGCCATCTCAATGGCTGATGGAGAGAAGCAGTTGCGGCATGAAAAGCATCATCGGTATGTTAGCACGCATGATGTGGCTTATTGGTCACGTAGTTTCTTGCAAGATATGGAGAGGGCTTGCTCAGACCTCCTGGGGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTCAGAGTTGTTGCACTTGATCCTAATTTTAGAAAGCTCTCCATTGATGCTATGGTTTCAGCCTACAAGGGGGCAAAGAGTAGGGCCATTTTGCTGGACTATGACGGCACGGTTATGCCACAGAACTCTCTTAATAAGAGTCCAAGTCCAGAGGTCATCTCTATTTTGAACACACTCAGTGCTGACCCTAAAAATGTAGTTTTCATTGTTAGTGGGAGGGGGAGGGATAGCTTAAGCAACTGGTTTACTCCCTGCAAAAAAATTGGAATTGCTGCAGAACATGGATACTTCTTGAGGTGGTCTCAGTGTGAAGAATGGGAAATTTGTGGAAAGAGCTCGGATTTTGGCTGGATTCAGATTGCTGAACCTGTGATGAAACTATATACAGAGGCAACTGATGGTTCTAGCATCGAGAAAAAGGAAAGTGCTCTGGTGTGGCAATACCGAGATGCAGACCTTGGTTTCGGATCTTCTCAGGCCAAGGAAATGTTGGATCATCTAGAAAGTGTTTTGGCCAATGAGCCAGTTGCTGTGAAGAGTGGTCAGTTCATTGTGGAAGTAAAGCCCCAGGATGTGAGCAAAGGCTTAGTTGCAGAAAATATCTTTTCATCAATGAATTTACAAGGGAAACAGGCTGACTTTGTGCTGTGTGTTGGTGACGACAGATCAGATGAGGATATGTTTGAAATAATCAGCATTGCTATGTCTAGAAATATTCTTTCTGCCAATTGTGCCGTATTTGCTTGCACAGTTGGACAAAAACCGAGTAAAGCCGAGTATTATTTGGACGATACGACTGAAGTCATTAGCATGCTAGAATCTTTAGCTGAAGAATCTGACTACTTAGAAGAAGCCGAGGATTCCTCTTGCGAACACCCATGA 2571 0.4127 MSRSYTNLLDLASGNFPAMDMEVKERKRLPRVMTVPGIISELDDDQAHSVSSDNPSTVSTVRMIIVANQLPLKASRNEDNKGWSFSWNEDSLLLQLKDGFPEDMEVLYVGSLRVVVDPAEQDDVSLCLLDKFNCVPTFLPPDVLTKFYDGFCKKQLWPLFHYMLPFSTDKNHRFDRSLWEAYVMANKIFFQKVVEIINPEDDYIWIHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGVHMDRIKIVMRMAHEESKVKELKQQFEGKTVLLGVDDMDVFKGIDLKILAMEQMLIQHPEWQGRAVLVQIVSPARGDVMHLEGMRAEIQESCSRINRAFGCPGYEPILFIDRPLSAAEKAAYYSIAECVVVTAVRDGMNLTPYEYIACRQEMPGSESCNNANGSKSMLVISEFIGCSPSLSGAVRVNPWNVETTAEAMNEAISMADGEKQLRHEKHHRYVSTHDVAYWSRSFLQDMERACSDLLGKRCWGIGLSFGFRVVALDPNFRKLSIDAMVSAYKGAKSRAILLDYDGTVMPQNSLNKSPSPEVISILNTLSADPKNVVFIVSGRGRDSLSNWFTPCKKIGIAAEHGYFLRWSQCEEWEICGKSSDFGWIQIAEPVMKLYTEATDGSSIEKKESALVWQYRDADLGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQDVSKGLVAENIFSSMNLQGKQADFVLCVGDDRSDEDMFEIISIAMSRNILSANCAVFACTVGQKPSKAEYYLDDTTEVISMLESLAEESDYLEEAEDSSCEHP 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3396 856 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 590 707 - -
Acco01g3396 856 FunFam Alpha,alpha-trehalose-phosphate synthase 316 528 - -
Acco01g3396 856 Pfam Trehalose-phosphatase 594 828 IPR003337 GO:0003824|GO:0005992
Acco01g3396 856 FunFam Trehalose-6-phosphate synthase 2 674 753 - -
Acco01g3396 856 NCBIfam HAD-IIB family hydrolase 593 796 IPR006379 -
Acco01g3396 856 CDD HAD_TPP 592 831 - -
Acco01g3396 856 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 55 314 - -
Acco01g3396 856 Gene3D Glycogen Phosphorylase B; 56 318 - -
Acco01g3396 856 Gene3D Glycogen Phosphorylase B; 319 529 - -
Acco01g3396 856 NCBIfam trehalose-phosphatase 588 839 IPR003337 GO:0003824|GO:0005992
Acco01g3396 856 SUPERFAMILY HAD-like 591 839 IPR036412 -
Acco01g3396 856 Gene3D - 719 852 IPR023214 -
Acco01g3396 856 Gene3D - 590 690 IPR023214 -
Acco01g3396 856 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 30 840 IPR001830 GO:0003824|GO:0005992
Acco01g3396 856 Pfam Glycosyltransferase family 20 62 544 IPR001830 GO:0003824|GO:0005992
Acco01g3396 856 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 62 547 - -
Acco01g3396 856 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 720 851 - -
Acco01g3396 856 CDD GT20_TPS 62 544 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3396 Acco-ChrAcco01 50958578 50962269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3396 1 843 Trehalose Biosynthesis Gene Families AT1G06410 76.631 0.0 1338