Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3395 ATGAACAGAAATTCCAACAATTTCACACCTTTACCTGGCGCTAGGCGATCTGTTGCAAGACCCTATGATAATTATAGAAGCTACGATGAGACTATTGTGTTCTACCAACCTCTTTCTATCCAAGATACTCCTGTAACTGGTGACAGGATTTCAGGCGTGCAAGACACCCCAAGGTTGATGGAAAACAGAACACGGTCAGGACTCAACCGCACGCCCAGTTTTCCGACACAACCACATAGCAGACGACAAATTAACGGATTCAATGAGAGCATGAGGAGGAGGTTGAACCCCATGTTCGGAGAGACTATCCAGCAGCCACCTCCAAGAACTGTAGAAAATCCAAATTCAGCAGTTTTGAGCAAGCTGAAGAAAGAAATATATGAGCCTCCAAAGATTGTACCAAAGAGAGTGAGCTTATGCTATAAAGACAGTGTTGCGAATGCTTTAAAAGAGAGAGAGAGGGAAAAGCAAGAACGTCGCAAGATGTGTACTATTTGCCTGGAAGATTTTGAACCTCGAGAGGAGGTGATGCTCACACCATGCAAACACGTGTTTCATGAGGATTGTATCGTACCATGGGTAAGAAGCGAAGGCCAGTGCCCTGTGTGCAGGTGTGTGATTTTTGAGGGGACGAGGGAACACACTTCATCCTTCAACGATGACATGGCCATGGTGGCACCCAGTGCCCTCCTAATTTCAGGCGAGCTTCTATCAATTTTCAGAGCCATGCCATAA 735 0.4585 MNRNSNNFTPLPGARRSVARPYDNYRSYDETIVFYQPLSIQDTPVTGDRISGVQDTPRLMENRTRSGLNRTPSFPTQPHSRRQINGFNESMRRRLNPMFGETIQQPPPRTVENPNSAVLSKLKKEIYEPPKIVPKRVSLCYKDSVANALKEREREKQERRKMCTICLEDFEPREEVMLTPCKHVFHEDCIVPWVRSEGQCPVCRCVIFEGTREHTSSFNDDMAMVAPSALLISGELLSIFRAMP 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3395 244 SMART ringv_2 162 204 IPR011016 GO:0008270
Acco01g3395 244 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 80 205 - -
Acco01g3395 244 SUPERFAMILY RING/U-box 162 210 - -
Acco01g3395 244 ProSiteProfiles Zinc finger RING-type profile. 163 204 IPR001841 -
Acco01g3395 244 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 147 220 IPR013083 -
Acco01g3395 244 MobiDBLite consensus disorder prediction 63 88 - -
Acco01g3395 244 FunFam RING/U-box superfamily protein 147 221 - -
Acco01g3395 244 Pfam Ring finger domain 161 204 IPR001841 -
Acco01g3395 244 SMART ring_2 163 203 IPR001841 -
Acco01g3395 244 MobiDBLite consensus disorder prediction 63 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3395 Acco-ChrAcco01 50956822 50957997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3395 113 243 C3H Transcription Factor Family AT3G58720 42.754 2.42e-30 112