Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3392 ATGGCTGCAAATAATAGTGGGGATCTTTCTCTCTCTGAAGGCTCTAGCATGTCAGGAGGGTCCAAAGGAAAAGGTTTCAGAGAAGTTATCAGAAAGCAGAAGATGAAGATGGTTCAAATCTATGACGACTCTCTTTATAAGACTAAGAAGATCAAACGAGATATCTTCAAATTTGGATCGAACATCACAGGTTCTTCATCAAAAATAGACATCAACAACAAGGGAAAAGATCATGACTGTCATTATCATGATGATGATGATCAGATGACGCAAAAAACTTTCAGTTGCAACTTTTGCAAGAGAGAGTTTTCTTCCTCACAGGCCTTAGGAGGCCATCAAAATGGGCACAAACAAGAGCGTGCAATGGCAAAACAACGACAAGCTGGGATTATTTTTCATAATCATTTTGGTTTTCCAGGGCGTCACTATTCTTCACACGTTACTTATTACGCTAACCCTCAGATTAATTATGGGCCTTTAGGTTATAACAATAGGCCATTTGGCGTTAAATTGGAGTTCATGATTCGTAAGCCTTCTTATAACCCGAGTTACAGATTCAGGCATGATCATCAAACCCTAGATAGGCTTATGGCAAGTTCATCAGGACCTTCAAAAATTGAAGAAATTGGTAAAAACAGTCCTATAACCTATCAATTCGAGCGAATTTCTCCTTCTTCAGCTACCACTGATGATACTGAAATTGGTGATCAACATATTAAGTTTACATCAGTAAAAGCTTCAAAAGAGGATGATGATAATCTTGATTCTTCAGGTCTTGACTTGACGCTTAGGCTTTAA 798 0.3822 MAANNSGDLSLSEGSSMSGGSKGKGFREVIRKQKMKMVQIYDDSLYKTKKIKRDIFKFGSNITGSSSKIDINNKGKDHDCHYHDDDDQMTQKTFSCNFCKREFSSSQALGGHQNGHKQERAMAKQRQAGIIFHNHFGFPGRHYSSHVTYYANPQINYGPLGYNNRPFGVKLEFMIRKPSYNPSYRFRHDHQTLDRLMASSSGPSKIEEIGKNSPITYQFERISPSSATTDDTEIGDQHIKFTSVKASKEDDDNLDSSGLDLTLRL 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3392 265 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 69 265 IPR044246 GO:0009788
Acco01g3392 265 SUPERFAMILY beta-beta-alpha zinc fingers 91 122 IPR036236 -
Acco01g3392 265 ProSiteProfiles Zinc finger C2H2 type domain profile. 94 121 IPR013087 -
Acco01g3392 265 ProSitePatterns Zinc finger C2H2 type domain signature. 96 116 IPR013087 -
Acco01g3392 265 Gene3D Classic Zinc Finger 72 135 - -
Acco01g3392 265 MobiDBLite consensus disorder prediction 1 25 - -
Acco01g3392 265 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3392 Acco-ChrAcco01 50949602 50951366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3392 91 181 C2H2 Transcription Factor Family AT5G10970 44.211 6.92e-14 68.2