Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3381 ATGGGAAAGAAAAGCATGTTTCGTTACTTGGATAAAGTGGACAAGTTGTTGATGCTGTTTGGTACTCTGGGAAGTTTTGAAGATGGGATACAAATGCCTCTCATGATGTTCATTCTTAGTAATGTAATTAATCACTATGGAAGCTCCAATAACGTTTTGACAAAGCAAGATGTAGACAAGATTCCCAACTGCTTGGCAAACATGTCCACAATTTTATCCTGCCATGTCTTTGCATTTATACTGTCATGGAGACTAACATTGGCAGCTATACCAATCACAGTCATGTTCATCGTTCCGGCACTTGTATTTGGGAAGATCATGTTGGATCTAGCAATGAAAATGATTGAATCTTATGGGGTTTCTGGTAGGATTGCAGAACAAGCAATATCATCAATAAGAACTGTTTATTCATATGTGGGGGAGAATCAAACACTGAACAGATTTAGCAGTGCCCTTGAGAAAACAATGGAACTGGGAATAAAACAGGGCTTTGCAAAGGGTCTGATGTTAGGCAGCCTAGGGATTTTATACATTGGTTGGGGCTTCCTGGCTTGGTTTGGTACTATTTTGATCACTGAGAAGGGAGAGCAGGGTGGGCATGTATTTGTGGCCGGGTTAATCATCCTCATGGGTGGCTTGATGGTGTTGAGTACGCTTCCACATTTAACCGCCATCACAAAGGCATCTGTAGCTGTCAACCGTCATTTTGAACTGATTGATAAAATGCGAACTACAGATTCTGGAGACAAAAAGAGAAGAGCTTTATCATATGTGAGAGGAGAAATTGAATTTCAAAATGTATACTTTAGTTACCCATCTAGGCCAGATACACCAGTCTTGCAAGGGCTTAACCTTACAATTCCAGCAGGCAAGAGAGTAGGCCTTGTGGGGTTTAGTGGTTCAGGCAAGTCCACCATCATTGCTTTGCTTGAGAGATTTTATGAACCTGTTGCAGGAGACATACTCTTGGATGGCCACAAGATCAACAGACTTAAGATAAAATGGTTGAGATCTCAATTTGGCCTAGTAAATCAAGAACCTGTTCTTTTTGCCACAACCATAAAAGAGAATATATTGTTTGGAAAAGAAGGATCCTCCATGGAAAGTGTGATAACTGCAGCTAAAGCAGCAAATGCACATGACTTCATCATCAATCTACCAGATGGATATGAAACCCAAGTTGGGCAGCTTGGATTTCAATTATCTGGAGGGCAAAAGCAGCGAGTTGCCATAGCAAGAGCTTTGCTCAGGGATCCAAAAGTTCTGCTTCTTGATGAAGCTACTAGTGCACTAGACTCACAATCAGAAAGAGTGGTACAAGCAGCAATTGAGCAAGCTTCAAAAGGAAGGACAACAGTCATAATTGCTCATCGTTTCTCTACAATACAATCTGCCCACATTATTGCAGTTCTTCAAGCTGGCAGAGTCATTGAATTAGGTGCTCATAATGAGCTCATGGAAATGAACAATGGACAAGGTGGGGAATATGCAAGGATGGTAGAGTTGCAACAAGTAAGAATAGTTAATGAAGATCCCAAATATTCCAATCTTAAAACAGAGGGAAGTGATCTCCACCGGAAGATAAGCACTCCAAGCAGCCCAATTTTATATCCATTTGATCAGGCTCATTCCATGGGTTCACCCTACTCTTTCTCCATCCAATATGATTCTAAAGATGATTTTACTGAAGATTTCTTCAAAATATCAACTTATCCAGCTCCTTCCACTTGGCGTTTGTTGGAGATGAATGCACCTGAGTGGAGAATAACAGCGCTTGGATGCTTGGGCGCACTAGGCTCTGGAGCAGTACAACCAATAAATGCATATTGTGTAGGGATACTTATATCAAATTATTTTGACAATGAAGTCGCTAAGAACAAGTCCAAAACTAGAGTCTTGGCTCTTACTTTCCTGGGAATTGGTGTTTTTAACTTCCTTACAAATATTCTTCAACACTATAGTTTTGCTGTTGGGGGAGAGAGATTGACTAAAAGAATACGGGAAAAATTACTAGGAAAATTGTCGACTTTCGAGATAAGCTGGTTTGATGATGAAGAGAACACAAGTGCAGCCATTTGTGCAAGATTAGCCTCTGAAGCTAACATGGTTCGCTCCCTTGTTGGAGATCGTTTGTCATTATTGACACAAGCAATTTTTGGATCTATATTTGCTTATGCTCTTGCATTGGTGCTTACATGGAGGCTATCCCTTGTGATGATTTCTGTACAACCATTAATCATAGGGAGCTTTTACTCAATAAGTGTCTTGATGAAGACGATGGCGAAAAAGGCCCGAAAAGCACAAAATGAAGGAAGCCAACTGGTAAGTGAAGCTGTAATAAACCACAGAACTATAACTGCCTTCAGTTCTCAGAAAAGAATGTTGGCCCTTTTCAAATCCACATTAGCACGTCCTCAAAAAGAGAGCATTAGACAGTCATGGATTTCAGGCTTTGGTCTTTTTTGCTCACAATTTTTCAACACTGCTGCAACAGCTTTAGCTTACTGGTATGGAGGGAGGCTTTTGATTGAAGGGAAAATAAAACCAACACATCTTTTTCAAGCATTTTTTATATTGTTCTTCAGTGCTTATATCATTGCAGAAGCTGGAAGCATGAGTTCTGACTTATCTAAAGGAAGCAGCGCAGTTCGATCAGTGTTTGAAGTCTTGGACAGAAAAAGTGAGATTGATCCTGAGAACACAGGGGAAGTAAGTATAAAGAACAAAATAAGGGGTGAAGTGGAACTTAAAAGTGTTTTCTTTGCGTATCCAACTAGACCAGAGCAGATGATTTTTAGGGGCCTGTGTCTTAAAGTTGAGGCAGGCAAAACGGTAGCAATAGTGGGACAAAGTGGTTGCGGTAAATCAACCATTATTGCTCTCATTGAAAGGTTTTACGACCCAGTGAATGGAACAGTGTGCATAGACGAACAAGACATCAAGTCCTATAACTTGAGAGAGCTAAGGTCACATATTGGCCTTGTGAGTCAGGAGCCAACCCTTTTCGCCGAAACCCTTCAAGAAAACATTGTTTATGGGAAAGAGAATGCAACTGAAGCTGAGATAAGAAAGGCTGCAGATTTGGCTAATGCTCATGAATTTATAAGTGGAATGAAGGATGGGTATGAGACATATTGTGGAGAGAGAGGGGTTCAGCTATCAGGAGGTCAGAAACAAAGGATAGCCTTGGCACGTGCGATATTGAAGGATCCTGCAATTTTATTGCTAGACGAGGCTACAAGTGCACTTGATAGTGTGTCAGAGAAGTTAGTTCAAGAAGCATTAGAGAAGATGATGGTTGGAAGAACATGCATCGTTGTGGCTCACAGGCTATCAACAATACATAAATCAAACTCTATTGCAGTGATTAAGAATGGGAAAGTTGTGGAGCAAGGTTCGCATGATGAACTAGTTTCTCTAGGACAAGATGGAGCATACCATTCTCTAGTTAAACTTCAACATGGCAAATCTCTTGGCAGGTAG 3483 0.4071 MGKKSMFRYLDKVDKLLMLFGTLGSFEDGIQMPLMMFILSNVINHYGSSNNVLTKQDVDKIPNCLANMSTILSCHVFAFILSWRLTLAAIPITVMFIVPALVFGKIMLDLAMKMIESYGVSGRIAEQAISSIRTVYSYVGENQTLNRFSSALEKTMELGIKQGFAKGLMLGSLGILYIGWGFLAWFGTILITEKGEQGGHVFVAGLIILMGGLMVLSTLPHLTAITKASVAVNRHFELIDKMRTTDSGDKKRRALSYVRGEIEFQNVYFSYPSRPDTPVLQGLNLTIPAGKRVGLVGFSGSGKSTIIALLERFYEPVAGDILLDGHKINRLKIKWLRSQFGLVNQEPVLFATTIKENILFGKEGSSMESVITAAKAANAHDFIINLPDGYETQVGQLGFQLSGGQKQRVAIARALLRDPKVLLLDEATSALDSQSERVVQAAIEQASKGRTTVIIAHRFSTIQSAHIIAVLQAGRVIELGAHNELMEMNNGQGGEYARMVELQQVRIVNEDPKYSNLKTEGSDLHRKISTPSSPILYPFDQAHSMGSPYSFSIQYDSKDDFTEDFFKISTYPAPSTWRLLEMNAPEWRITALGCLGALGSGAVQPINAYCVGILISNYFDNEVAKNKSKTRVLALTFLGIGVFNFLTNILQHYSFAVGGERLTKRIREKLLGKLSTFEISWFDDEENTSAAICARLASEANMVRSLVGDRLSLLTQAIFGSIFAYALALVLTWRLSLVMISVQPLIIGSFYSISVLMKTMAKKARKAQNEGSQLVSEAVINHRTITAFSSQKRMLALFKSTLARPQKESIRQSWISGFGLFCSQFFNTAATALAYWYGGRLLIEGKIKPTHLFQAFFILFFSAYIIAEAGSMSSDLSKGSSAVRSVFEVLDRKSEIDPENTGEVSIKNKIRGEVELKSVFFAYPTRPEQMIFRGLCLKVEAGKTVAIVGQSGCGKSTIIALIERFYDPVNGTVCIDEQDIKSYNLRELRSHIGLVSQEPTLFAETLQENIVYGKENATEAEIRKAADLANAHEFISGMKDGYETYCGERGVQLSGGQKQRIALARAILKDPAILLLDEATSALDSVSEKLVQEALEKMMVGRTCIVVAHRLSTIHKSNSIAVIKNGKVVEQGSHDELVSLGQDGAYHSLVKLQHGKSLGR 1160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3381 1160 PANTHER ABC TRANSPORTER B FAMILY 586 1152 IPR039421 -
Acco01g3381 1160 CDD ABC_MTABC3_MDL1_MDL2 914 1153 - -
Acco01g3381 1160 Gene3D - 260 516 IPR027417 -
Acco01g3381 1160 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 591 878 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco01g3381 1160 Gene3D - 903 1154 IPR027417 -
Acco01g3381 1160 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 59 227 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco01g3381 1160 Pfam ABC transporter transmembrane region 592 863 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco01g3381 1160 Pfam ABC transporter transmembrane region 61 211 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco01g3381 1160 Gene3D ABC transporter type 1, transmembrane domain 1 58 IPR036640 GO:0005524|GO:0016020
Acco01g3381 1160 Gene3D ABC transporter type 1, transmembrane domain 787 902 IPR036640 GO:0005524|GO:0016020
Acco01g3381 1160 CDD ABC_6TM_Pgp_ABCB1_D1_like 59 234 - -
Acco01g3381 1160 CDD ABC_6TM_Pgp_ABCB1_D2_like 582 896 - -
Acco01g3381 1160 SUPERFAMILY ABC transporter transmembrane region 4 240 IPR036640 GO:0005524|GO:0016020
Acco01g3381 1160 FunFam ABC transporter B family member 4 252 510 - -
Acco01g3381 1160 SUPERFAMILY ABC transporter transmembrane region 578 897 IPR036640 GO:0005524|GO:0016020
Acco01g3381 1160 FunFam ABC transporter B family member 4 904 1157 - -
Acco01g3381 1160 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 907 1153 IPR027417 -
Acco01g3381 1160 Gene3D ABC transporter type 1, transmembrane domain 59 749 IPR036640 GO:0005524|GO:0016020
Acco01g3381 1160 Pfam ABC transporter 935 1081 IPR003439 GO:0005524
Acco01g3381 1160 ProSitePatterns ABC transporters family signature. 1053 1067 IPR017871 GO:0005524|GO:0016887
Acco01g3381 1160 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 262 498 IPR003439 GO:0005524
Acco01g3381 1160 SMART AAA_5 941 1127 IPR003593 GO:0016887
Acco01g3381 1160 SMART AAA_5 289 481 IPR003593 GO:0016887
Acco01g3381 1160 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 914 1150 IPR003439 GO:0005524
Acco01g3381 1160 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 252 503 IPR027417 -
Acco01g3381 1160 Pfam ABC transporter 280 429 IPR003439 GO:0005524
Acco01g3381 1160 CDD ABC_MTABC3_MDL1_MDL2 262 503 - -
Acco01g3381 1160 ProSitePatterns ABC transporters family signature. 401 415 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3381 Acco-ChrAcco01 50880557 50885979 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3381 59 504 Calmodulin-binding Proteins AT2G36910 37.611 2.60e-88 310