Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3373 ATGGCAATTCGACGAATTTTGAGTGTTGCAACGGTCAGCTTTTGCGTTCTTTTGTTTCTTCTTCTTACTTCAACTGGTAACTTGCAAGAGAGTGAAGAAACACGAACAGACTTCCTTAGCCAGCTACTTGATCCGTCATCTGGATTGTTGTTAGATGATAACACGGCAGAACAGTTATGGTCCTCATGCTGGGTGGATTTTATTCAGTTAAAGAGAGAGGTAGATGATCTTGTTATATGGTTCCCGCAAGAACCATCCAGTAGTCCAGATGAAAATTCAGATATCCGATATTTGTTGAGAGAAAACATCCAAAAATTGATTAATTCTCACCATCCACAGTTAAAGCAAACTTTTCTTCAATGTTTGAGACAGAATGGTCTACCGTTCCATGTCTCTGGAGAAGAGGCTGATTCTAAGACATGGCATGCCTCGTTTATAGAATCAATGTTTTCTGGATCCAGCGTTCCTAGAAGAAATTTGGCTCAAGAATTTCCTCAACACATATCAGTAGCACCTAGCCCAGGTCCTGTGGTTATGTCACCATCTCCCAGTCCAGCACCATCACTAGCGCCAGTCTCATCACCTGCCATCTCTCAAGTTCCTAAATCTGGGCATCCTTCTTCATCACCTGAAACTCCATTCTTCCGACAGCTGGATCCTCCAGCTATTGATGATACCACTGGACGGTCAGATGCTGATACACAGGCAGATAAGAAAAGTAATCATGAAAGAACAGTTGTTCTTGCCGTAGTAATAACTGCTCTTGTGACATTTGTAATTGCAGCACTGCTATTTTTATGCTGCAGTAGGTTTTATAGGACTCGTCGTGGTAGACAAAATGATGAGCGACCCCTTCTCAGCCTGAGCATGAGTGACTACTCTGTTGGCTCTCCCCATTATCCTTTTGGAAATTCAGTCAAAGAGGATAAACTTGGGTTTCAGTCATCAAGTAATAGCACTGGTGACCACAAAAAGATATCATCTGTGAATGCCAATTCCTATGTTAGCTCCAATATTTTCCATAACACATTGCTGGAAGCTCAGTCAATAGAGGCTGTCGGTGTTGCTGAGGGAACCGCCACTTCTGGATTTCCTACTCTAAAACCTCCTCCTGGGAGGATGGGAACCACCACTTCCAGATTGCCTCCTTTGAAACCTCCTCCTGGGAGGGCTGGAACCACCACTTCAGGATTGCCTCCTCTAAAACCTCCTCCTGGCAGACTGAGTCCCCTTCCCCCTGAACCACCTTTTAGACCTGATAATGCTGCTCCCCCTCCACCTCCACCTTCCGCACCTTCACAACCTGTGAAATCTCACTTTGATGCTGGTGGAGTTCCAACTCCAGGACCTCCTCCACCTCCGGCACCCCCACAACCACTGAAACATCATTCTAATGTCAGTGGAGCTCCACCTCCTGGACCTCCACCACCACCACCAGTGCCACCTGGTGCCCGACCAGGTGCTCATCCACCACCACCTCCTCCTCCAAAGGGCAGTATAGCCCCTCCAAGACCTCTTCCACCTAGCGGTCCAAAGACAGCACAGCAAAAATCACAGAATGCAGGAGCTGGTTCAGAAGGTGAAGGCCATGCTCCCAAAGCCAAGCTAAAACCTTTTTTCTGGGATAAGGTCCAAGCCAACTCAGATCATTCAATGGTCTGGAGTCAGATTAAATCAGGATCATTCCAATTCAATGAAGAGATGATAGAGACTCTTTTTGGATATAGTAATGTGGATAAACACAAAAGCGAGCCAAAGAAAGATTCATCATCCCAAGACCCTGCAACTCAGTATATCCAGATAATTGACAGGAAAAGAGCACAAAATTTGTTGATTTTGCTGCGAGCCTTGAACATCACTACAGAAGAAGTTTGTGATGCACTTCATGAGGGAAATGAGCTTCCCTCAGAATTTCTGCAAACCTTGTTGAAGATGGCACCAACATCCGACGAAGAACTTAAGCTTAGACTTTTCAGTGGTGAAATATCCCAACTTGGGCCTGCAGACCGGTTCCTAAAAGCTTTGGTTGACATTCCATTTGCTTTTAAACGAATGGAAGTGTTGCTTTTCATGAGTACTTCTCAAGAGGATCTCACTGCTACTAAGGAGTCCTTTGCGATTTTAGAGGTTGCATGTAAGGAACTAAGAAGCAGTCGGCTGTTCCTCAAGCTTCTAGAAGCTGTTCTTAAAACTGGAAACCGTATGAATGATGGTACATATCGTGGTGGTGCACAAGCATTTAAACTTGATACGCTACTGAAACTGTCTGATGTGAAAGGAACGGATGGCAAGACCACACTCTTGCACTTCGTAGTCCAAGAGATAGTCCGTTCTGAGGGCAAAAGAGCTGCTCGACTGGAAAGAGAAAATCAGAGATCTTCTGATATTAAAAATGATGGCCGTGTTGAGGATGTATCTGATGAAACTGAGGAACACTATCACGATCTTGGTCTTCAGGTGGTTTCACATTTGAGCAGTGAACTAGAGAATGTCAAGAAAGCAGCAACTATTGATGCTGACAGCTTAACGGGAACTGCGGCCAAACTTGGTCATGGTCTCCTTAAAATCAGAAATTTTGTTAACTCTGACTTGAAGAGCATAGAGGAAGATAGAGAATTTTGTCAGGCAGTGAAGGCTTTTGTGCAGGATGCTGAGAATGATGTCACTAGTCTGCTGGAAGAAGAGAAGAAAATCATGACTCTGGTGAAGAGCACTGGTGATTATTTTCACGGTAAAGCTGGGAAAGATGAAGGATTGCGGGTGTTTGTGATTGTACGGGACTTCTTGCTGATGTTAGATAAGGTGTGCAAGGAGGTGACAGACGTCCAGAAGAGGCAAGCAAAAGCTCAAAAGCAGGAGGCGCCTAAAGCATCATCTTCCTCTGATGTTCGTTCACCACCTGATTTTCGTCAGCTGCTATTTCCAGCAATTGCAGATAGGCGGGTGAAAGACGATAGTTCAGACGATGAGAATGAACCTTGA 2982 0.449 MAIRRILSVATVSFCVLLFLLLTSTGNLQESEETRTDFLSQLLDPSSGLLLDDNTAEQLWSSCWVDFIQLKREVDDLVIWFPQEPSSSPDENSDIRYLLRENIQKLINSHHPQLKQTFLQCLRQNGLPFHVSGEEADSKTWHASFIESMFSGSSVPRRNLAQEFPQHISVAPSPGPVVMSPSPSPAPSLAPVSSPAISQVPKSGHPSSSPETPFFRQLDPPAIDDTTGRSDADTQADKKSNHERTVVLAVVITALVTFVIAALLFLCCSRFYRTRRGRQNDERPLLSLSMSDYSVGSPHYPFGNSVKEDKLGFQSSSNSTGDHKKISSVNANSYVSSNIFHNTLLEAQSIEAVGVAEGTATSGFPTLKPPPGRMGTTTSRLPPLKPPPGRAGTTTSGLPPLKPPPGRLSPLPPEPPFRPDNAAPPPPPPSAPSQPVKSHFDAGGVPTPGPPPPPAPPQPLKHHSNVSGAPPPGPPPPPPVPPGARPGAHPPPPPPPKGSIAPPRPLPPSGPKTAQQKSQNAGAGSEGEGHAPKAKLKPFFWDKVQANSDHSMVWSQIKSGSFQFNEEMIETLFGYSNVDKHKSEPKKDSSSQDPATQYIQIIDRKRAQNLLILLRALNITTEEVCDALHEGNELPSEFLQTLLKMAPTSDEELKLRLFSGEISQLGPADRFLKALVDIPFAFKRMEVLLFMSTSQEDLTATKESFAILEVACKELRSSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIVRSEGKRAARLERENQRSSDIKNDGRVEDVSDETEEHYHDLGLQVVSHLSSELENVKKAATIDADSLTGTAAKLGHGLLKIRNFVNSDLKSIEEDREFCQAVKAFVQDAENDVTSLLEEEKKIMTLVKSTGDYFHGKAGKDEGLRVFVIVRDFLLMLDKVCKEVTDVQKRQAKAQKQEAPKASSSSDVRSPPDFRQLLFPAIADRRVKDDSSDDENEP 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3373 993 MobiDBLite consensus disorder prediction 445 460 - -
Acco01g3373 993 SUPERFAMILY Formin homology 2 domain (FH2 domain) 474 950 - -
Acco01g3373 993 MobiDBLite consensus disorder prediction 361 533 - -
Acco01g3373 993 MobiDBLite consensus disorder prediction 175 240 - -
Acco01g3373 993 Pfam Formin Homology 2 Domain 530 932 IPR015425 -
Acco01g3373 993 ProSiteProfiles Formin homology-2 (FH2) domain profile. 526 958 IPR015425 -
Acco01g3373 993 MobiDBLite consensus disorder prediction 176 190 - -
Acco01g3373 993 Gene3D Formin, FH2 domain 531 965 IPR042201 -
Acco01g3373 993 MobiDBLite consensus disorder prediction 952 966 - -
Acco01g3373 993 MobiDBLite consensus disorder prediction 191 214 - -
Acco01g3373 993 MobiDBLite consensus disorder prediction 946 969 - -
Acco01g3373 993 MobiDBLite consensus disorder prediction 468 510 - -
Acco01g3373 993 SMART it6_source 526 946 IPR015425 -
Acco01g3373 993 PANTHER FORMIN-RELATED 450 981 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Acco01g3373 993 MobiDBLite consensus disorder prediction 398 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3373 Acco-ChrAcco01 50805967 50811658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3373 487 943 FH2 protein (formin) Gene Family AT3G05470 47.845 9.95e-125 399
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3373 01 50805967 50811658 Acco08g0864 08 7830822 7836434 CCT
Acco01g3373 01 50805967 50811658 Acco01g3373 01 50805967 50811658 ECH