Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3371 ATGCCAACAGTTTGGTTCTCTCTCAAGAAGTCACTACACTGCAAATCAGAGCCATCAGAAGTTCATGACCCGAAATCCAGAAAGCATTTGAGCACAATCTTAACGAAAAGGGCTGGTAGGTCTGGGTGTTCGAGGAGTATTGCAAATCTCAAAGATGTGATCCATGGAAGCAAAAGGCATCTCGAGAAGCCACCAAGTTGCAGTCCAAGATCCATTGGGAGCAGTGAGTTTCTCAATCCAATAACCCACGAAGTGATTTTAAGCAACTCAAGGTGTGAGCTTAAAATCACTGGCTTTGGAGGATTTCAAGATGGGGTTGGCGGCGGCGCTAACGGCGGTGGAGGAGGTGGCGGTGGCGGTGGCAATGGCAATAATGGTGGTGGTGGGGGCTCTACCTTTGTGGGTACCTTAAGGCCTGGGACTCCGGGACCCGGAGGACACCCTACAATGCACTACTTCAATCCTTCTTTTAGGACATCAACCACACCTCCAAGGAAATCTCCAAGTCCTTTTCTTTTATCAGATAAAGAAGGGTCTGCTTTGCATGGTGGAGGTGGTGGGCTTCATTCTAGCAATAGGATGTCTCTTGAGACTGACTCTAATGGCTGTTCCACTGTCACTTGTCACAAATGTGGAGAACAATTTACCAAATGGGAAGCTGCCGAGACTCATCATCTCTCCAAGCATGCTGTCACTGAGCTTGTGGAAGGCGATTCATCAAGGAAGATAGTGGAGATAATATGCAGGACGAGCTGGTTAAAGTCTGAGAATCACTGTGGCCGAATAGAGAGAGTTTTGAAGGTCCACAACATGCAAAAGACACTGGCTCGATTTGAAGAGTACAGAGAGATGGTAAAAATCAAAGCCGGCAAACTCCCAAAGAAACATCCTCGGTGTCTCGCTGATGGAAACGAACTTTTAAGGTTTTATGGCACTACAGTGTCCTGCAATCTTGGTCTCAACGGCTCATCCAGCCTCTGCCTCTCAGAAAAATGTTGTGTTTGTCGAATTATCAGAAATGGGTTCTCTGCAAAGAAGGAGCTCAAGGGTGGAATTGGACTTTTCACAACTTCCACAAGCGGAAGGGCATTTGAATCTATTGAGATCCTTGATGATGACATCTCAATCAGAAAAGCACTTATTGTTTGCAGAGTAATAGCTGGCAGGGTTCATAGGCCACTCGATAACATTCAAGAAATGGCAGGGCAAACAGGGTTTGATTCCTTGGCCGGCAAAGTTGGTCTTTATTCAAACATAGAGGAGCTTTATCTGCTCAATCCCAAAGCCCTTCTTCCTTGCTTTGTCGTAATTTGCAAGCCCTGA 1323 0.4633 MPTVWFSLKKSLHCKSEPSEVHDPKSRKHLSTILTKRAGRSGCSRSIANLKDVIHGSKRHLEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFGGFQDGVGGGANGGGGGGGGGGNGNNGGGGGSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSTTPPRKSPSPFLLSDKEGSALHGGGGGLHSSNRMSLETDSNGCSTVTCHKCGEQFTKWEAAETHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIKAGKLPKKHPRCLADGNELLRFYGTTVSCNLGLNGSSSLCLSEKCCVCRIIRNGFSAKKELKGGIGLFTTSTSGRAFESIEILDDDISIRKALIVCRVIAGRVHRPLDNIQEMAGQTGFDSLAGKVGLYSNIEELYLLNPKALLPCFVVICKP 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3371 440 Gene3D - 221 439 - -
Acco01g3371 440 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 438 - -
Acco01g3371 440 SUPERFAMILY ADP-ribosylation 231 439 - -
Acco01g3371 440 MobiDBLite consensus disorder prediction 117 188 - -
Acco01g3371 440 FunFam C2H2-like zinc finger protein 230 439 - -
Acco01g3371 440 MobiDBLite consensus disorder prediction 153 168 - -
Acco01g3371 440 ProSitePatterns Zinc finger C2H2 type domain signature. 208 229 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3371 Acco-ChrAcco01 50790266 50792020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3371 1 440 C2H2 Transcription Factor Family AT5G54630 66.808 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco01g3371 None None None